RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
SMG6-207ENST00000570756 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 ANKRD65E5RJM6 399 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
SMG6-207ENST00000570756 ERVK-24P63145 666 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 CKAP4Q07065 602 aaKnown RBP17.41■□□□□ 0.38
SMG6-207ENST00000570756 TRAPPC11Q7Z392 1133 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 CCDC91Q7Z6B0 441 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 FAM76AQ8TAV0 307 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 CEP89Q96ST8 783 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 MYH7P12883 1935 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 ERLIN2O94905 339 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 GCP02774 474 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 STX17P56962 302 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
SMG6-207ENST00000570756 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
SMG6-207ENST00000570756 PSMD14O00487 310 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 EBAG9O00559 213 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 TBC1D10CQ8IV04 446 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 TRIM22Q8IYM9 498 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 ANKRD20A12PQ8NF67 263 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 USP8P40818 1118 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 SPAG1Q07617 926 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 XAGE2Q96GT9 111 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 ZNF594Q96JF6 807 aaPredicted RBP17.4■□□□□ 0.38
SMG6-207ENST00000570756 SLC12A7Q9Y666 1083 aa17.4■□□□□ 0.38
SMG6-207ENST00000570756 SOS2Q07890 1332 aaPredicted RBP17.39■□□□□ 0.38
SMG6-207ENST00000570756 N4BP3O15049 544 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 IFNAR1P17181 557 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 SLF1Q9BQI6 1058 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 HAUS4Q9H6D7 363 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
SMG6-207ENST00000570756 SAR1BQ9Y6B6 198 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.37
SMG6-207ENST00000570756 B4E1Z4 1266 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 ABL1P00519 1130 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 LIFRP42702 1097 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 ZAP70P43403 619 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 EHBP1Q8NDI1 1231 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 CSRNP2Q9H175 543 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 SEC31BQ9NQW1 1179 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
SMG6-207ENST00000570756 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
SMG6-207ENST00000570756 GOLGA6CA6NDK9 693 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 GOLGA6DP0CG33 693 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 CD44P16070 742 aaKnown RBP17.38■□□□□ 0.37
SMG6-207ENST00000570756 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMG6-207ENST00000570756 GOLGA6AQ9NYA3 693 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 LIMA1Q9UHB6 759 aaKnown RBP17.38■□□□□ 0.37
SMG6-207ENST00000570756 GUCA1BQ9UMX6 200 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 APPP05067 770 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 GGCXP38435 758 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 CCT6AP40227 531 aaKnown RBP17.38■□□□□ 0.37
SMG6-207ENST00000570756 GBP6Q6ZN66 633 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
SMG6-207ENST00000570756 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
SMG6-207ENST00000570756 ALS2Q96Q42 1657 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 SHTN1A0MZ66 631 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 LRRC10BA6NIK2 292 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 EXOC5O00471 708 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 NDUFA10O95299 355 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 ADORA1P30542 326 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 AFMP43652 599 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 IQCEQ6IPM2 695 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 PUS3Q9BZE2 481 aaKnown RBP17.37■□□□□ 0.37
SMG6-207ENST00000570756 SENP2Q9HC62 589 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
SMG6-207ENST00000570756 EPN1Q9Y6I3 576 aaPredicted RBP17.37■□□□□ 0.37
SMG6-207ENST00000570756 LAMB4A4D0S4 1761 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 TNS3Q68CZ2 1445 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 PPP1R3GB7ZBB8 358 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 PHKG2P15735 406 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 KRT9P35527 623 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 PPFIA1Q13136 1202 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 KRT31Q15323 416 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 MYL10Q9BUA6 226 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 KCNJ14Q9UNX9 436 aa17.37■□□□□ 0.37
SMG6-207ENST00000570756 ATRNO75882 1429 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 LOC102724159A0A0B4J2E5 919 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 GOLGA6BA6NDN3 693 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 CCT5P48643 541 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
SMG6-207ENST00000570756 PWP2Q15269 919 aaKnown RBP17.36■□□□□ 0.37
SMG6-207ENST00000570756 CCDC57Q2TAC2 916 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 PAPD7Q5XG87 772 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms