RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
RAB40B-203ENST00000570676 IRF5Q13568 498 aa18.19■□□□□ 0.5
RAB40B-203ENST00000570676 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
RAB40B-203ENST00000570676 TSHZ3Q63HK5 1081 aa18.19■□□□□ 0.5
RAB40B-203ENST00000570676 USP17L2Q6R6M4 530 aa18.19■□□□□ 0.5
RAB40B-203ENST00000570676 SLC44A5Q8NCS7 719 aa18.19■□□□□ 0.5
RAB40B-203ENST00000570676 TXNRD2Q9NNW7 524 aa18.19■□□□□ 0.5
RAB40B-203ENST00000570676 ADCY3O60266 1144 aa18.18■□□□□ 0.5
RAB40B-203ENST00000570676 PEX10O60683 326 aa18.18■□□□□ 0.5
RAB40B-203ENST00000570676 HERVK_113P62684 666 aa18.18■□□□□ 0.5
RAB40B-203ENST00000570676 POTEEQ6S8J3 1075 aa18.18■□□□□ 0.5
RAB40B-203ENST00000570676 ACER1Q8TDN7 264 aa18.18■□□□□ 0.5
RAB40B-203ENST00000570676 P2RX7Q99572 595 aaKnown RBP18.18■□□□□ 0.5
RAB40B-203ENST00000570676 KIAA1683Q9H0B3 1180 aa18.18■□□□□ 0.5
RAB40B-203ENST00000570676 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
RAB40B-203ENST00000570676 SMIM22K7EJ46 135 aa18.17■□□□□ 0.5
RAB40B-203ENST00000570676 ELNP15502 786 aa18.17■□□□□ 0.5
RAB40B-203ENST00000570676 ZYXQ15942 572 aaKnown RBP18.17■□□□□ 0.5
RAB40B-203ENST00000570676 PXYLP1Q8TE99 480 aa18.17■□□□□ 0.5
RAB40B-203ENST00000570676 COA7Q96BR5 231 aa18.17■□□□□ 0.5
RAB40B-203ENST00000570676 FEZ1Q99689 392 aa18.17■□□□□ 0.5
RAB40B-203ENST00000570676 ATP8A2Q9NTI2 1148 aa18.17■□□□□ 0.5
RAB40B-203ENST00000570676 CCL5P13501 91 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 VCAM1P19320 739 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 UBXN2AP68543 259 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 SEPT2Q15019 361 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 ZSCAN25Q6NSZ9 544 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 KBTBD3Q8NAB2 608 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 DYNLL2Q96FJ2 89 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 SWAP70Q9UH65 585 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 TAOK2Q9UL54 1235 aa18.16■□□□□ 0.5
RAB40B-203ENST00000570676 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 INHAP05111 366 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 USP14P54578 494 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 C12orf60Q5U649 245 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 OTUD7AQ8TE49 926 aaPredicted RBP18.15■□□□□ 0.5
RAB40B-203ENST00000570676 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 UNC93B1Q9H1C4 597 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 RBPJLQ9UBG7 517 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
RAB40B-203ENST00000570676 GJB1P08034 283 aa18.14■□□□□ 0.49
RAB40B-203ENST00000570676 PDE4AP27815 886 aa18.14■□□□□ 0.49
RAB40B-203ENST00000570676 PI4K2BQ8TCG2 481 aa18.14■□□□□ 0.49
RAB40B-203ENST00000570676 GTF3C2Q8WUA4 911 aaPredicted RBP18.14■□□□□ 0.49
RAB40B-203ENST00000570676 BIN2Q9UBW5 565 aaPredicted RBP18.14■□□□□ 0.49
RAB40B-203ENST00000570676 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
RAB40B-203ENST00000570676 TTC41PQ6P2S7 1318 aa18.14■□□□□ 0.49
RAB40B-203ENST00000570676 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
RAB40B-203ENST00000570676 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L12C9JPN9 530 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L21D6R901 530 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 CNMDO75829 334 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 AKR1B1P15121 316 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 GJA8P48165 433 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 ERVK-9P63128 1117 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 ERVK-24P63145 666 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 TMEM179Q6ZVK1 233 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 C16orf86Q6ZW13 317 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 CLEC10AQ8IUN9 316 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 RNF208Q9H0X6 261 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 FRMPD3Q5JV73 1810 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 ZNF236Q9UL36 1845 aa18.13■□□□□ 0.49
RAB40B-203ENST00000570676 ALPK3Q96L96 1907 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
RAB40B-203ENST00000570676 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 Q3C1V9 767 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 NKX2-3Q8TAU0 364 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 APPBP2Q92624 585 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 OSBP2Q969R2 916 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 STRBPQ96SI9 672 aaKnown RBP18.12■□□□□ 0.49
RAB40B-203ENST00000570676 PAGR1Q9BTK6 254 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 PORCNQ9H237 461 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 ARPP21Q9UBL0 812 aaPredicted RBP18.12■□□□□ 0.49
RAB40B-203ENST00000570676 ROBO3Q96MS0 1386 aa18.12■□□□□ 0.49
RAB40B-203ENST00000570676 COL11A1P12107 1806 aaPredicted RBP18.12■□□□□ 0.49
RAB40B-203ENST00000570676 SPDYE16A6NNV3 312 aaPredicted RBP18.11■□□□□ 0.49
RAB40B-203ENST00000570676 RNF113AO15541 343 aaKnown RBP18.11■□□□□ 0.49
RAB40B-203ENST00000570676 CDK8P49336 464 aa18.11■□□□□ 0.49
RAB40B-203ENST00000570676 CTR9Q6PD62 1173 aa18.11■□□□□ 0.49
RAB40B-203ENST00000570676 LBX2Q6XYB7 198 aa18.11■□□□□ 0.49
RAB40B-203ENST00000570676 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
RAB40B-203ENST00000570676 U2AF1L4Q8WU68 220 aaKnown RBP18.11■□□□□ 0.49
RAB40B-203ENST00000570676 RPAP3Q9H6T3 665 aaPredicted RBP18.11■□□□□ 0.49
RAB40B-203ENST00000570676 PAK6Q9NQU5 681 aaPredicted RBP18.11■□□□□ 0.49
RAB40B-203ENST00000570676 MKI67P46013 3256 aaKnown RBP18.11■□□□□ 0.49
RAB40B-203ENST00000570676 MYH4Q9Y623 1939 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 GSG1L2A8MUP6 293 aa18.1■□□□□ 0.49
RAB40B-203ENST00000570676 M0R2C6 588 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms