RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PRO3102Q9H379 93 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 COG6Q9Y2V7 657 aa10.46□□□□□ -0.73
CTDNEP1-203ENST00000570385 ALPK3Q96L96 1907 aa10.46□□□□□ -0.74
CTDNEP1-203ENST00000570385 ZNF532Q9HCE3 1301 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SOX1O00570 391 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 CNMDO75829 334 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 CYP2D6P10635 497 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 PDE6AP16499 860 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 VCAM1P19320 739 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 GUCY1A2P33402 732 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 CACNB2Q08289 660 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SEPT2Q15019 361 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 PLEKHH3Q7Z736 793 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SLC44A5Q8NCS7 719 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SDR42E1Q8WUS8 393 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SOCS4Q8WXH5 440 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 EHD4Q9H223 541 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 C11orf49Q9H6J7 331 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 CABP5Q9NP86 173 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SZT2Q5T011 3432 aa10.45□□□□□ -0.74
CTDNEP1-203ENST00000570385 SMIM22K7EJ46 135 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 CHGBP05060 677 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 IFIT2P09913 472 aaKnown RBP10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 RGS2P41220 211 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 HSP90AB4PQ58FF6 505 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 MORN1Q5T089 497 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 CATSPERGQ6ZRH7 1159 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 CLASRPQ8N2M8 674 aaKnown RBP10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 LCORLQ8N3X6 602 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP6NLQ92738 828 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 C12orf42Q96LP6 360 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 CRNKL1Q9BZJ0 848 aaKnown RBP10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 KIAA1683Q9H0B3 1180 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 BOLA2Q9H3K6 86 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 RPAP3Q9H6T3 665 aaPredicted RBP10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 ARMT1Q9H993 441 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 BTBD7Q9P203 1132 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 OGDHLQ9ULD0 1010 aa10.44□□□□□ -0.74
CTDNEP1-203ENST00000570385 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 A0A1W2PRG0 241 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 PRKAB2O43741 272 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 IGSF3O75054 1194 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 USP14P54578 494 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 TTF1Q15361 905 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 CERS3Q8IU89 383 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 CLEC10AQ8IUN9 316 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 GTF3C2Q8WUA4 911 aaPredicted RBP10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 KIF1BPQ96EK5 621 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 DYNLL2Q96FJ2 89 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 APBA2Q99767 749 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 FLRT1Q9NZU1 646 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 RABGAP1Q9Y3P9 1069 aa10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
CTDNEP1-203ENST00000570385 PFASO15067 1338 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 CYP2D7A0A087X1C5 515 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 TCRBV5S4A2TA0A5A2 114 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 SPDYE16A6NNV3 312 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 MBD4O95243 580 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 CAPN2P17655 700 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 CNGA1P29973 690 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 CCNA1P78396 465 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 GABPAQ06546 454 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 KIAA1755Q5JYT7 1200 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 LHX8Q68G74 356 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 DCP1AQ9NPI6 582 aaPredicted RBP10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 ZBTB40Q9NUA8 1239 aa10.42□□□□□ -0.74
CTDNEP1-203ENST00000570385 SMARCA5O60264 1052 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 HMMRO75330 724 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 GLRX3O76003 335 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 PTPREP23469 700 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 CYP2C19P33261 490 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 MAGEA10P43363 369 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 ATP2B2Q01814 1243 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 MFSD14CQ5VZR4 134 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 RPAP2Q8IXW5 612 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 SPICE1Q8N0Z3 855 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 NPLOC4Q8TAT6 608 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 GDF15Q99988 308 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 PAG1Q9NWQ8 432 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms