RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 RCSD1Q6JBY9 416 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 DLK2Q6UY11 383 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 CDC37L1Q7L3B6 337 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 DGKHQ86XP1 1220 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 RAB11FIP4Q86YS3 637 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 CLEC10AQ8IUN9 316 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 KAT14Q9H8E8 782 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 ZBTB21Q9ULJ3 1066 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 SLC12A7Q9Y666 1083 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 NF2P35240 595 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 EVCP57679 992 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 SEPT2Q15019 361 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 MAP1SQ66K74 1059 aaPredicted RBP18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 APOA5Q6Q788 366 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 CATIPQ7Z7H3 387 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 MICU3Q86XE3 530 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 ZNF654Q8IZM8 581 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 MTMR4Q9NYA4 1195 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 GREB1LQ9C091 1923 aaPredicted RBP18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 PHF20L1A8MW92 1017 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 ZBTB43O43298 467 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 PDIA3P30101 505 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 CAP2P40123 477 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 JAG1P78504 1218 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 ATP2B2Q01814 1243 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 ICA1Q05084 483 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 NECAB1Q8N987 351 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 ANKS1AQ92625 1134 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 WRNIP1Q96S55 665 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 MYL10Q9BUA6 226 aa18.05■□□□□ 0.48
HERPUD1-219ENST00000570273 GOLGA8AA7E2F4 631 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 PFKFB2O60825 505 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 TTLL1O95922 423 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 TOP1P11387 765 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 PRKG1Q13976 671 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 SPRYD3Q8NCJ5 442 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 NUP133Q8WUM0 1156 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 TMEM47Q9BQJ4 181 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 KANSL2Q9H9L4 492 aa18.04■□□□□ 0.48
HERPUD1-219ENST00000570273 CTNND1O60716 968 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 DDAH1O94760 285 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 RXRAP19793 462 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 INPP5BP32019 993 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 METAP2P50579 478 aaKnown RBP eCLIP18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 CCT2P78371 535 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 CUL4AQ13619 759 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 LRRC47Q8N1G4 583 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 PNMA1Q8ND90 353 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 CLIP2Q9UDT6 1046 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 FZD1Q9UP38 647 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 HPS5Q9UPZ3 1129 aa18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 POLR2AP24928 1970 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-219ENST00000570273 PPP1R12BO60237 982 aaPredicted RBP18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 TOMM70O94826 608 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 ASNSP08243 561 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 NOVP48745 357 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 RCAN1P53805 252 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 ST3GAL1Q11201 340 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 NCOA5Q9HCD5 579 aaKnown RBP18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 GINM1Q9NU53 330 aa18.02■□□□□ 0.48
HERPUD1-219ENST00000570273 NID2Q14112 1375 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 CALM1P0DP23 149 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 CALM2P0DP24 149 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 CALM3P0DP25 149 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 EEF2P13639 858 aaKnown RBP18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 SCRN1Q12765 414 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 TTLL12Q14166 644 aaPredicted RBP18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 RTN1Q16799 776 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 KLRG1Q96E93 195 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 NYAP2Q9P242 653 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 MTMR7Q9Y216 660 aa18.01■□□□□ 0.47
HERPUD1-219ENST00000570273 TRAF5O00463 557 aa18■□□□□ 0.47
HERPUD1-219ENST00000570273 IREB2P48200 963 aaKnown RBP18■□□□□ 0.47
HERPUD1-219ENST00000570273 SCYL3Q8IZE3 742 aa18■□□□□ 0.47
HERPUD1-219ENST00000570273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18■□□□□ 0.472e-12■■■□□ 17.9
HERPUD1-219ENST00000570273 RBM46Q8TBY0 533 aaKnown RBP18■□□□□ 0.47
HERPUD1-219ENST00000570273 ARHGEF10LQ9HCE6 1279 aa18■□□□□ 0.47
HERPUD1-219ENST00000570273 PICK1Q9NRD5 415 aa18■□□□□ 0.47
HERPUD1-219ENST00000570273 USP2O75604 605 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 TROAPQ12815 778 aa17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 CHADLQ6NUI6 762 aa17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 ZKSCAN4Q969J2 545 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 CHMP4CQ96CF2 233 aa17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 ZNF408Q9H9D4 720 aa17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-219ENST00000570273 DOCK1Q14185 1865 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms