RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 TM4SF20Q53R12 229 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 BRDTQ58F21 947 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 SAMD5Q5TGI4 173 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 GK5Q6ZS86 529 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 SPATC1Q76KD6 591 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 REC114Q7Z4M0 266 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 LSRQ86X29 649 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 NCAPG2Q86XI2 1143 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 ZSWIM2Q8NEG5 633 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 NGDNQ8NEJ9 315 aaKnown RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 CHAC2Q8WUX2 184 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 JARID2Q92833 1246 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 RELTQ969Z4 430 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 GSX2Q9BZM3 304 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 CRISPLD1Q9H336 500 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 EHMT1Q9H9B1 1298 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 POLMQ9NP87 494 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-221ENST00000569924 PRDM11Q9NQV5 511 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 PFDN2Q9UHV9 154 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 KCNH4Q9UQ05 1017 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 PCDHB5Q9Y5E4 795 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 ITSN1Q15811 1721 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 SPATA31A1Q5TZJ5 1347 aa4.2□□□□□ -1.74
CNOT1-221ENST00000569924 ATP7BP35670 1465 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 POLR3AO14802 1390 aaPredicted RBP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 A0A096LPE4 126 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 A0A1W2PPZ6 126 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 ALG1L2C9J202 215 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 ATE1O95260 518 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 BMP6P22004 513 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 PMLP29590 882 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 SOX18P35713 384 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 STAT3P40763 770 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 CDKN1CP49918 316 aaPredicted RBP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 HYAL2Q12891 473 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 LONRF2Q1L5Z9 754 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 ZC3H12BQ5HYM0 836 aaKnown RBP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 TMED8Q6PL24 325 aaPredicted RBP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 LYSMD3Q7Z3D4 306 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 PRICKLE2Q7Z3G6 844 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 NLRP8Q86W28 1048 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 DDX42Q86XP3 938 aaKnown RBP eCLIP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 THNSL2Q86YJ6 484 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 CEP120Q8N960 986 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 NINJ1Q92982 152 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 NXPE3Q969Y0 559 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 MFSD3Q96ES6 412 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 CAMKK2Q96RR4 588 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 BHLHE41Q9C0J9 482 aaPredicted RBP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 CAAP1Q9H8G2 361 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 TIMMDC1Q9NPL8 285 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 TMEM39AQ9NV64 488 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 TLR7Q9NYK1 1049 aaKnown RBP4.19□□□□□ -1.74
CNOT1-221ENST00000569924 CYP8B1Q9UNU6 501 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 SAMM50Q9Y512 469 aa4.19□□□□□ -1.74
CNOT1-221ENST00000569924 ARHGEF28Q8N1W1 1705 aaKnown RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 CPDO75976 1380 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 KIAA0232Q92628 1395 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 PHRF1Q9P1Y6 1649 aaKnown RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 CCDC163A0A0D9SF12 145 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 A0A1W2PQH9 124 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 C11orf95C9JLR9 678 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 KHNYNO15037 678 aaKnown RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 BPNT1O95861 308 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 PSAPP07602 524 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 FAM153BP0C7A2 387 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 RARAP10276 462 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 MYCLP1P12525 358 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 HOXD8P13378 290 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 ACPPP15309 386 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 RHBDL3P58872 404 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 PPP2R3AQ06190 1150 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 FAAP100Q0VG06 881 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 BIRC2Q13490 618 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 R3HDM1Q15032 1099 aaKnown RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 C21orf62-AS1Q17RA5 79 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 TMEM67Q5HYA8 995 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 COL13A1Q5TAT6 717 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 RASIP1Q5U651 963 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 CCSAPQ6IQ19 270 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 C6orf15Q6UXA7 325 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 KRT25Q7Z3Z0 450 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 FAM178BQ8IXR5 827 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 NIM1KQ8IY84 436 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 TMEM102Q8N9M5 508 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 RNF217Q8TC41 542 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 DCAF11Q8TEB1 546 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 SPOCK3Q9BQ16 436 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 ZNF576Q9H609 170 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 PRDM16Q9HAZ2 1276 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 ZFATQ9P243 1243 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 GPN3Q9UHW5 284 aaPredicted RBP4.18□□□□□ -1.74
CNOT1-221ENST00000569924 TOPAZ1Q8N9V7 1692 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 RREB1Q92766 1687 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 SSH2Q76I76 1423 aa4.18□□□□□ -1.74
CNOT1-221ENST00000569924 BRD4O60885 1362 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 RAB3GAP2Q9H2M9 1393 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 LMO7Q8WWI1 1683 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 A0A087X0B3 334 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 METTL12A8MUP2 240 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms