RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 ZBTB22O15209 634 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 URI1O94763 535 aaPredicted RBP9.12□□□□□ -0.95
SPG7-220ENST00000569363 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 NTSR2O95665 410 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 FGRP09769 529 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 BMP6P22004 513 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 BCAMP50895 628 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 CHRNDQ07001 517 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 SPAG1Q07617 926 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 NAA30Q147X3 362 aaPredicted RBP9.12□□□□□ -0.95
SPG7-220ENST00000569363 NR1I3Q14994 352 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 ARHGAP29Q52LW3 1261 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 IFIT1BQ5T764 474 aaKnown RBP9.12□□□□□ -0.95
SPG7-220ENST00000569363 JAKMIP3Q5VZ66 844 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
SPG7-220ENST00000569363 TMCO3Q6UWJ1 677 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 SH3RF1Q7Z6J0 888 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 TMEM139Q8IV31 216 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 PDILTQ8N807 584 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 SYTL4Q96C24 671 aaPredicted RBP9.12□□□□□ -0.95
SPG7-220ENST00000569363 CSRNP2Q9H175 543 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 INCENPQ9NQS7 918 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 RMND1Q9NWS8 449 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 THRAP3Q9Y2W1 955 aaKnown RBP9.12□□□□□ -0.95
SPG7-220ENST00000569363 PCDHB6Q9Y5E3 794 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 TACC3Q9Y6A5 838 aa9.12□□□□□ -0.95
SPG7-220ENST00000569363 SYNRGQ9UMZ2 1314 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 VWA3AA6NCI4 1184 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 MINDY4BA8MYZ0 360 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 ORC4O43929 436 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 TADA3O75528 432 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 CCDC175P0C221 793 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 CRKLP46109 303 aaKnown RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 GNG11P61952 73 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 NR5A1Q13285 461 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 TRIM14Q14142 442 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 ERCC6LQ2NKX8 1250 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 CCDC178Q5BJE1 867 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 POTEHQ6S545 545 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 CLEC4GQ6UXB4 293 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 ZNF771Q7L3S4 317 aaPredicted RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 ANKRD18AQ8IVF6 992 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 FAM177A1Q8N128 213 aaPredicted RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 GPR161Q8N6U8 529 aaKnown RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 TC2NQ8N9U0 490 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 MIGA1Q8NAN2 632 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 ANKRD20A12PQ8NF67 263 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 PAGE5Q96GU1 130 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 ZKSCAN3Q9BRR0 538 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 INTS13Q9NVM9 706 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPG7-220ENST00000569363 V9GYY5 206 aaPredicted RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 DUOX1Q9NRD9 1551 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 DOT1LQ8TEK3 1739 aa9.11□□□□□ -0.95
SPG7-220ENST00000569363 MYO5AQ9Y4I1 1855 aaKnown RBP9.11□□□□□ -0.95
SPG7-220ENST00000569363 SLIT2O94813 1529 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 BCL9LQ86UU0 1499 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 FOXN1O15353 648 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 CALML3P27482 149 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 FMR1Q06787 632 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPG7-220ENST00000569363 FUT2Q10981 343 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 SF3B3Q15393 1217 aaKnown RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 PKN1Q16512 942 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 SPECC1Q5M775 1068 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 TTC38Q5R3I4 469 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 CDKAL1Q5VV42 579 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 TMTC3Q6ZXV5 915 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 CNGA4Q8IV77 575 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 ENAHQ8N8S7 591 aaPredicted RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 IQUBQ8NA54 791 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 CTCFLQ8NI51 663 aaPredicted RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 DHX58Q96C10 678 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 RIOK1Q9BRS2 568 aaKnown RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 BSDC1Q9NW68 430 aaPredicted RBP9.1□□□□□ -0.95
SPG7-220ENST00000569363 TAOK2Q9UL54 1235 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 NIP7Q9Y221 180 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPG7-220ENST00000569363 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
SPG7-220ENST00000569363 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 GTPBP6O43824 516 aaPredicted RBP9.09□□□□□ -0.95
SPG7-220ENST00000569363 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 KIF5BP33176 963 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 TXLNAP40222 546 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 CLCN6P51797 869 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 ATP2C1P98194 919 aaPredicted RBP9.09□□□□□ -0.95
SPG7-220ENST00000569363 GRIN1Q05586 938 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 PPP2R3AQ06190 1150 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 DPYDQ12882 1025 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 CUL4BQ13620 913 aa9.09□□□□□ -0.95
SPG7-220ENST00000569363 TERF2Q15554 542 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms