RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 RTP1P59025 263 aa15.3■□□□□ 0.04
SNX29-207ENST00000568949 RLFQ13129 1914 aa15.3■□□□□ 0.04
SNX29-207ENST00000568949 GRB14Q14449 540 aa15.3■□□□□ 0.04
SNX29-207ENST00000568949 CATSPERGQ6ZRH7 1159 aa15.3■□□□□ 0.04
SNX29-207ENST00000568949 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
SNX29-207ENST00000568949 SEMA6BQ9H3T3 888 aa15.3■□□□□ 0.04
SNX29-207ENST00000568949 GH2P01242 217 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 IGHA2P01877 340 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 CNGA1P29973 690 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 G3BP1Q13283 466 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNX29-207ENST00000568949 SHHQ15465 462 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 ADGRA1Q86SQ6 560 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 ARRDC4Q8NCT1 418 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 MAFAQ8NHW3 353 aaPredicted RBP15.29■□□□□ 0.04
SNX29-207ENST00000568949 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 CDCA7LQ96GN5 454 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 FEZ1Q99689 392 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 KIAA1683Q9H0B3 1180 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 NDUFB9Q9Y6M9 179 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 IVNS1ABPQ9Y6Y0 642 aa15.29■□□□□ 0.04
SNX29-207ENST00000568949 TTC28Q96AY4 2481 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 CYBAP13498 195 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 CYP2C19P33261 490 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
SNX29-207ENST00000568949 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 NPLOC4Q8TAT6 608 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 GPR108Q9NPR9 543 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 SNRKQ9NRH2 765 aa15.28■□□□□ 0.04
SNX29-207ENST00000568949 SAP30BPQ9UHR5 308 aaKnown RBP15.28■□□□□ 0.04
SNX29-207ENST00000568949 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.04
SNX29-207ENST00000568949 VCAM1P19320 739 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 CCDC158Q5M9N0 1113 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 OLFML2BQ68BL8 750 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 SLC39A5Q6ZMH5 540 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 CERS3Q8IU89 383 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.04
SNX29-207ENST00000568949 PRDM6Q9NQX0 595 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 BTBD7Q9P203 1132 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.04
SNX29-207ENST00000568949 MYH1P12882 1939 aa15.27■□□□□ 0.03
SNX29-207ENST00000568949 MYO5AQ9Y4I1 1855 aaKnown RBP15.27■□□□□ 0.03
SNX29-207ENST00000568949 KBTBD13C9JR72 458 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 GNAI2P04899 355 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 SNX17Q15036 470 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 ZYXQ15942 572 aaKnown RBP15.26■□□□□ 0.03
SNX29-207ENST00000568949 C9orf50Q5SZB4 431 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 GJC2Q5T442 439 aaPredicted RBP15.26■□□□□ 0.03
SNX29-207ENST00000568949 EHD4Q9H223 541 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 ZNF236Q9UL36 1845 aa15.26■□□□□ 0.03
SNX29-207ENST00000568949 PNMA6EA0A0J9YXQ4 647 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
SNX29-207ENST00000568949 STRNO43815 780 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 TNNI3KQ59H18 835 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 C1orf53Q5VUE5 145 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 DPP9Q86TI2 863 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 MYLIPQ8WY64 445 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
SNX29-207ENST00000568949 DBNDD2Q9BQY9 259 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 FPGT-TNNI3KV9GXZ4 949 aa15.25■□□□□ 0.03
SNX29-207ENST00000568949 TMEM265A0A087WTH1 108 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 SEPT4O43236 478 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 CYP7A1P22680 504 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 DYNLL1P63167 89 aaKnown RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 TTC6Q86TZ1 520 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 BADQ92934 168 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 TTYH1Q9H313 450 aaPredicted RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 RPAP3Q9H6T3 665 aaPredicted RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 CABP5Q9NP86 173 aa15.24■□□□□ 0.03
SNX29-207ENST00000568949 PIH1D3Q9NQM4 214 aaKnown RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 PRDM5Q9NQX1 630 aaPredicted RBP15.24■□□□□ 0.03
SNX29-207ENST00000568949 ADORA2AP29274 412 aa15.23■□□□□ 0.03
SNX29-207ENST00000568949 ZAP70P43403 619 aa15.23■□□□□ 0.03
SNX29-207ENST00000568949 USP5P45974 858 aa15.23■□□□□ 0.03
SNX29-207ENST00000568949 SHCBP1Q8NEM2 672 aa15.23■□□□□ 0.03
SNX29-207ENST00000568949 MOV10L1Q9BXT6 1211 aaKnown RBP15.23■□□□□ 0.03
SNX29-207ENST00000568949 PDLIM7Q9NR12 457 aa15.23■□□□□ 0.03
SNX29-207ENST00000568949 HOXC10Q9NYD6 342 aa15.23■□□□□ 0.03
SNX29-207ENST00000568949 FOSL2P15408 326 aa15.22■□□□□ 0.03
SNX29-207ENST00000568949 COG2Q14746 738 aa15.22■□□□□ 0.03
SNX29-207ENST00000568949 TMED8Q6PL24 325 aaPredicted RBP15.22■□□□□ 0.03
SNX29-207ENST00000568949 SLC5A4Q9NY91 659 aa15.22■□□□□ 0.03
SNX29-207ENST00000568949 DNAH12Q6ZR08 3092 aa15.22■□□□□ 0.03
SNX29-207ENST00000568949 TRIM43BA6NCK2 446 aa15.21■□□□□ 0.03
SNX29-207ENST00000568949 IPO8O15397 1037 aaKnown RBP15.21■□□□□ 0.03
SNX29-207ENST00000568949 ADCYAP1R1P41586 468 aa15.21■□□□□ 0.03
SNX29-207ENST00000568949 LRRC41Q15345 812 aa15.21■□□□□ 0.03
SNX29-207ENST00000568949 SH3RF1Q7Z6J0 888 aa15.21■□□□□ 0.03
SNX29-207ENST00000568949 TRIM43Q96BQ3 446 aaPredicted RBP15.21■□□□□ 0.03
SNX29-207ENST00000568949 TACC3Q9Y6A5 838 aa15.21■□□□□ 0.03
SNX29-207ENST00000568949 LAMA2P24043 3122 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms