RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 KCNH4Q9UQ05 1017 aa11.97□□□□□ -0.49
PKM-221ENST00000568743 LAMA4Q16363 1823 aa11.97□□□□□ -0.49
PKM-221ENST00000568743 ATAD5Q96QE3 1844 aa11.97□□□□□ -0.49
PKM-221ENST00000568743 PLIN4Q96Q06 1357 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 CCL15-CCL14A0A0B4J2E2 113 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 IGKV6D-41A0A0C4DH26 115 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 A0A1W2PRG0 241 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 KDM4AO75164 1064 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.49
PKM-221ENST00000568743 HMGCS2P54868 508 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 SNAPC2Q13487 334 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 COL9A3Q14050 684 aaPredicted RBP11.96□□□□□ -0.49
PKM-221ENST00000568743 CCL15Q16663 113 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 NEDD1Q8NHV4 660 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 ESR2Q92731 530 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 CEP95Q96GE4 821 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 FEZ1Q99689 392 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 ZKSCAN3Q9BRR0 538 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 WDR18Q9BV38 432 aa11.96□□□□□ -0.49
PKM-221ENST00000568743 MANSC4A6NHS7 340 aaPredicted RBP11.95□□□□□ -0.5
PKM-221ENST00000568743 CXCL11O14625 94 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 PCP11498 1178 aaKnown RBP11.95□□□□□ -0.5
PKM-221ENST00000568743 TRDNQ13061 729 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 MOGSQ13724 837 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 CYB5R4Q7L1T6 521 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 CHMP4CQ96CF2 233 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 PTPN18Q99952 460 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 KRT23Q9C075 422 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 KANSL2Q9H9L4 492 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 IL17RBQ9NRM6 502 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 MTMR4Q9NYA4 1195 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 CLIP2Q9UDT6 1046 aa11.95□□□□□ -0.5
PKM-221ENST00000568743 MYH8P13535 1937 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 A0A0G2JLL6 359 aaPredicted RBP11.94□□□□□ -0.5
PKM-221ENST00000568743 USP17L10C9JJH3 530 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 IGF2BP3O00425 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
PKM-221ENST00000568743 RAD21O60216 631 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 CETPP11597 493 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 HSPA4P34932 840 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 MAP2K2P36507 400 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 BACE1P56817 501 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 ADCK5Q3MIX3 580 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 CHST3Q7LGC8 479 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 PRRT2Q7Z6L0 340 aaPredicted RBP11.94□□□□□ -0.5
PKM-221ENST00000568743 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
PKM-221ENST00000568743 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 NCOA7Q8NI08 942 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 SNX14Q9Y5W7 946 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 PHIPQ8WWQ0 1821 aa11.94□□□□□ -0.5
PKM-221ENST00000568743 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 ZKSCAN1P17029 563 aaPredicted RBP11.93□□□□□ -0.5
PKM-221ENST00000568743 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 GPAT2Q6NUI2 795 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
PKM-221ENST00000568743 SPICE1Q8N0Z3 855 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 LRRC47Q8N1G4 583 aaKnown RBP11.93□□□□□ -0.5
PKM-221ENST00000568743 KIAA1683Q9H0B3 1180 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 EMILIN3Q9NT22 766 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 NYAP2Q9P242 653 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
PKM-221ENST00000568743 GREB1LQ9C091 1923 aaPredicted RBP11.92□□□□□ -0.5
PKM-221ENST00000568743 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
PKM-221ENST00000568743 C19orf81C9J6K1 198 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 TTLL1O95922 423 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 CPA1P15085 419 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 TM4SF4P48230 202 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 ANTXR2P58335 489 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 SH3D19Q5HYK7 790 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 RCSD1Q6JBY9 416 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 KCNB2Q92953 911 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 JAKMIP1Q96N16 626 aaKnown RBP11.92□□□□□ -0.5
PKM-221ENST00000568743 ZSCAN10Q96SZ4 725 aaPredicted RBP11.92□□□□□ -0.5
PKM-221ENST00000568743 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 TMOD4Q9NZQ9 345 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 MTMR7Q9Y216 660 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 TMX2Q9Y320 296 aa11.92□□□□□ -0.5
PKM-221ENST00000568743 TNKSO95271 1327 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 PDHXO00330 501 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 EPB41L2O43491 1005 aaKnown RBP11.91□□□□□ -0.5
PKM-221ENST00000568743 PRC1O43663 620 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 MCCP23508 829 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 USP14P54578 494 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 INHBEP58166 350 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
PKM-221ENST00000568743 FASTKD5Q7L8L6 764 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms