RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 FEZ1Q99689 392 aa19.22■□□□□ 0.67
HERPUD1-215ENST00000568676 KIAA1683Q9H0B3 1180 aa19.22■□□□□ 0.67
HERPUD1-215ENST00000568676 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
HERPUD1-215ENST00000568676 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
HERPUD1-215ENST00000568676 BCAR3O75815 825 aa19.21■□□□□ 0.67
HERPUD1-215ENST00000568676 USP5P45974 858 aa19.21■□□□□ 0.67
HERPUD1-215ENST00000568676 MFSD14CQ5VZR4 134 aa19.21■□□□□ 0.67
HERPUD1-215ENST00000568676 PIH1D3Q9NQM4 214 aaKnown RBP19.21■□□□□ 0.67
HERPUD1-215ENST00000568676 SAP30BPQ9UHR5 308 aaKnown RBP19.21■□□□□ 0.67
HERPUD1-215ENST00000568676 SLC15A5A6NIM6 579 aa19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 HOXC6P09630 235 aa19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 CCND3P30281 292 aaPredicted RBP19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 CABP5Q9NP86 173 aa19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 DBNLQ9UJU6 430 aaKnown RBP19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 IVNS1ABPQ9Y6Y0 642 aa19.2■□□□□ 0.66
HERPUD1-215ENST00000568676 PEX10O60683 326 aa19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 IDH1O75874 414 aaKnown RBP19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 DYNLL1P63167 89 aaKnown RBP19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 MAP3K12Q12852 859 aa19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 CCL14Q16627 93 aa19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 SHROOM1Q2M3G4 852 aaPredicted RBP19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 CERKLQ49MI3 558 aaPredicted RBP19.19■□□□□ 0.66
HERPUD1-215ENST00000568676 PTPREP23469 700 aa19.18■□□□□ 0.66
HERPUD1-215ENST00000568676 RAB3GAP1Q15042 981 aa19.18■□□□□ 0.66
HERPUD1-215ENST00000568676 ABCB5Q2M3G0 1257 aa19.18■□□□□ 0.66
HERPUD1-215ENST00000568676 POTEEQ6S8J3 1075 aa19.18■□□□□ 0.66
HERPUD1-215ENST00000568676 TNNQ9UQP3 1299 aa19.18■□□□□ 0.66
HERPUD1-215ENST00000568676 CNMDO75829 334 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 VCAM1P19320 739 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 LRRC26Q2I0M4 334 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 MAGEB6Q8N7X4 407 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 LPAR1Q92633 364 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 MTMR10Q9NXD2 777 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 DDX20Q9UHI6 824 aaKnown RBP19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 COL6A3P12111 3177 aa19.17■□□□□ 0.66
HERPUD1-215ENST00000568676 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 GRB14Q14449 540 aa19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 ZYXQ15942 572 aaKnown RBP19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 WDR78Q5VTH9 848 aa19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 ERC1Q8IUD2 1116 aa19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 FTSJ3Q8IY81 847 aaKnown RBP19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 LBHD1Q9BQE6 289 aaPredicted RBP19.16■□□□□ 0.66
HERPUD1-215ENST00000568676 MYH1P12882 1939 aa19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 DNM1LO00429 736 aa19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 STRNO43815 780 aa19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 TTF1Q15361 905 aaPredicted RBP19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 FAM109BQ6ICB4 259 aaPredicted RBP19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 CCDC8Q9H0W5 538 aaPredicted RBP19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 HOXC10Q9NYD6 342 aa19.15■□□□□ 0.66
HERPUD1-215ENST00000568676 SENP6Q9GZR1 1112 aaPredicted RBP19.14■□□□□ 0.65
HERPUD1-215ENST00000568676 TLR7Q9NYK1 1049 aaKnown RBP19.14■□□□□ 0.65
HERPUD1-215ENST00000568676 PRKAG2Q9UGJ0 569 aa19.14■□□□□ 0.65
HERPUD1-215ENST00000568676 MYO5AQ9Y4I1 1855 aaKnown RBP19.14■□□□□ 0.65
HERPUD1-215ENST00000568676 SPDYE16A6NNV3 312 aaPredicted RBP19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 OLFML2BQ68BL8 750 aa19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 Q7L0L9 218 aa19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 ARRDC4Q8NCT1 418 aa19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 RPAP3Q9H6T3 665 aaPredicted RBP19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 SLC5A4Q9NY91 659 aa19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 FLRT1Q9NZU1 646 aa19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 BTBD7Q9P203 1132 aa19.13■□□□□ 0.65
HERPUD1-215ENST00000568676 FRMPD3Q5JV73 1810 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 CNGA1P29973 690 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 SHMT1P34896 483 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 MDM2Q00987 491 aaPredicted RBP19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 COG2Q14746 738 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 HSP90AB4PQ58FF6 505 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 MB21D1Q8N884 522 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 SHCBP1Q8NEM2 672 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 ACER1Q8TDN7 264 aa19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 RIOK1Q9BRS2 568 aaKnown RBP19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 CRNKL1Q9BZJ0 848 aaKnown RBP19.12■□□□□ 0.65
HERPUD1-215ENST00000568676 IGHA2P01877 340 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 POLR3DP05423 398 aaPredicted RBP19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 PLCD1P51178 756 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 GABPAQ06546 454 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 DPP9Q86TI2 863 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 ITPRIPQ8IWB1 547 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 ZNF236Q9UL36 1845 aa19.11■□□□□ 0.65
HERPUD1-215ENST00000568676 MAGEB6P1A0A0J9YX57 407 aa19.1■□□□□ 0.65
HERPUD1-215ENST00000568676 POTEB2H3BUK9 544 aa19.1■□□□□ 0.65
HERPUD1-215ENST00000568676 CYBAP13498 195 aa19.1■□□□□ 0.65
HERPUD1-215ENST00000568676 NPLOC4Q8TAT6 608 aa19.1■□□□□ 0.65
HERPUD1-215ENST00000568676 ANTXR1Q9H6X2 564 aa19.1■□□□□ 0.65
HERPUD1-215ENST00000568676 NDUFB9Q9Y6M9 179 aa19.1■□□□□ 0.65
HERPUD1-215ENST00000568676 CYP2C19P33261 490 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 GUCY1A2P33402 732 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 AACSQ86V21 672 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 ABRAQ8N0Z2 381 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 SPATC1LQ9H0A9 340 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 MROH8Q9H579 483 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 SWAP70Q9UH65 585 aa19.09■□□□□ 0.65
HERPUD1-215ENST00000568676 KBTBD13C9JR72 458 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 SEPT4O43236 478 aa19.08■□□□□ 0.64
HERPUD1-215ENST00000568676 ADORA2AP29274 412 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms