RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SPTBN5Q9NRC6 3674 aaKnown RBP14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 SLC15A5A6NIM6 579 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 CNMDO75829 334 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 GH2P01242 217 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 GNAI2P04899 355 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 HOXC6P09630 235 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 PTPREP23469 700 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 CCDC158Q5M9N0 1113 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 FLRT1Q9NZU1 646 aa14.46□□□□□ -0.09
GTF3C1-209ENST00000568569 SIPA1L1O43166 1804 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 CNGA1P29973 690 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 USP14P54578 494 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 ATP2B2Q01814 1243 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 GRB14Q14449 540 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 ZYXQ15942 572 aaKnown RBP14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 LBX2Q6XYB7 198 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 KIAA1683Q9H0B3 1180 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 NDUFB9Q9Y6M9 179 aa14.45□□□□□ -0.1
GTF3C1-209ENST00000568569 PNMA6EA0A0J9YXQ4 647 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 CYP2E1P05181 493 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 VCAM1P19320 739 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 RTP1P59025 263 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 TATDN1Q6P1N9 297 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 CATSPERGQ6ZRH7 1159 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 CERS3Q8IU89 383 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 GPR108Q9NPR9 543 aa14.44□□□□□ -0.1
GTF3C1-209ENST00000568569 MUC3AQ02505 3323 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 CYP2C19P33261 490 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 NPLOC4Q8TAT6 608 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 ZNF512BQ96KM6 892 aaPredicted RBP14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 DBNDD2Q9BQY9 259 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 EHD4Q9H223 541 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
GTF3C1-209ENST00000568569 MAST2Q6P0Q8 1798 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 CYBAP13498 195 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 CYP7A1P22680 504 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 USP5P45974 858 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 DYNLL1P63167 89 aaKnown RBP14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 ARRDC4Q8NCT1 418 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 CDX2Q99626 313 aaPredicted RBP14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 BTBD7Q9P203 1132 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 ATP11BQ9Y2G3 1177 aa14.42□□□□□ -0.1
GTF3C1-209ENST00000568569 TTC28Q96AY4 2481 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 SPDYE16A6NNV3 312 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 KBTBD13C9JR72 458 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 IGHA2P01877 340 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 ZAP70P43403 619 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 SHHQ15465 462 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 ABCB5Q2M3G0 1257 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 CERKLQ49MI3 558 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 OLFML2BQ68BL8 750 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 TRPV1Q8NER1 839 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 MAFAQ8NHW3 353 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 ACER1Q8TDN7 264 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 RPAP3Q9H6T3 665 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 CABP5Q9NP86 173 aa14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 PIH1D3Q9NQM4 214 aaKnown RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-209ENST00000568569 IDH1O75874 414 aaKnown RBP14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 TRIM27P14373 513 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 ADORA2AP29274 412 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 SMAD3P84022 425 aaKnown RBP14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 SNX17Q15036 470 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 SLC39A5Q6ZMH5 540 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 DPP9Q86TI2 863 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 TTC6Q86TZ1 520 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 MIGA1Q8NAN2 632 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
GTF3C1-209ENST00000568569 SEPT4O43236 478 aa14.39□□□□□ -0.11
GTF3C1-209ENST00000568569 STRNO43815 780 aa14.39□□□□□ -0.11
GTF3C1-209ENST00000568569 TRIM60Q495X7 471 aa14.39□□□□□ -0.11
GTF3C1-209ENST00000568569 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
GTF3C1-209ENST00000568569 BADQ92934 168 aa14.39□□□□□ -0.11
GTF3C1-209ENST00000568569 MOV10L1Q9BXT6 1211 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-209ENST00000568569 FRMPD3Q5JV73 1810 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 POLA2Q14181 598 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 ANO1Q5XXA6 986 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 TMED8Q6PL24 325 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 MAGEB6Q8N7X4 407 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 SPATC1LQ9H0A9 340 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 PDLIM7Q9NR12 457 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 HOXC10Q9NYD6 342 aa14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 DBNLQ9UJU6 430 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-209ENST00000568569 FOCADQ5VW36 1801 aa14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 SURF6O75683 361 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 SHMT1P34896 483 aa14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 COG2Q14746 738 aa14.37□□□□□ -0.11
GTF3C1-209ENST00000568569 C1orf53Q5VUE5 145 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms