RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 MAP3K10Q02779 954 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 TNNI3KQ59H18 835 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 VARS2Q5ST30 1063 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 PRRT2Q7Z6L0 340 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 CERS3Q8IU89 383 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 FOXP4Q8IVH2 680 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 CCAR1Q8IX12 1150 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 CRACR2BQ8N4Y2 399 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 GLMNQ92990 594 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 COA7Q96BR5 231 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 ZNF333Q96JL9 665 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 CALR3Q96L12 384 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 DDX4Q9NQI0 724 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 AATFQ9NY61 560 aaKnown RBP eCLIP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 SRRDQ9UH36 339 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 HERC5Q9UII4 1024 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 AFG3L2Q9Y4W6 797 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 FPGT-TNNI3KV9GXZ4 949 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 ATAD5Q96QE3 1844 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 DOCK1Q14185 1865 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 MYO5AQ9Y4I1 1855 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 MYPNQ86TC9 1320 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 MYH1P12882 1939 aa5.68□□□□□ -1.5
HERPUD1-213ENST00000568358 RBBP6Q7Z6E9 1792 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 HMMRO75330 724 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 IDH1O75874 414 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 ASNSP08243 561 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 CYP2C8P10632 490 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 CAPN2P17655 700 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 CYP7A1P22680 504 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 CLCN1P35523 988 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 CAP2P40123 477 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 USP5P45974 858 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 GCLCP48506 637 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 RHBDL3P58872 404 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 MAP3K12Q12852 859 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 SPP2Q13103 211 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 TTF1Q15361 905 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 TMEM259Q4ZIN3 620 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 GPAT2Q6NUI2 795 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 GPR153Q6NV75 609 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 TMED8Q6PL24 325 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 PI16Q6UXB8 463 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 SH3BP5LQ7L8J4 393 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 ZNF280CQ8ND82 737 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 SH3RF3Q8TEJ3 882 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 SH3TC2Q8TF17 1288 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 TGFBRAP1Q8WUH2 860 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 ZNF512BQ96KM6 892 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 DBNDD2Q9BQY9 259 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 ARHGAP39Q9C0H5 1083 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 CCDC8Q9H0W5 538 aaPredicted RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 GINM1Q9NU53 330 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 TMOD4Q9NZQ9 345 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 AGTPBP1Q9UPW5 1226 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 TNNQ9UQP3 1299 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 NOP58Q9Y2X3 529 aaKnown RBP5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 PTPRFP10586 1907 aa5.67□□□□□ -1.5
HERPUD1-213ENST00000568358 C19orf81C9J6K1 198 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 TNPO2O14787 897 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ADCY3O60266 1144 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 SLC34A2O95436 690 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 CYP2E1P05181 493 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 IFIT2P09913 472 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 BCRP11274 1271 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ERCC3P19447 782 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 RFC5P40937 340 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ZAP70P43403 619 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 PPP4CP60510 307 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 IRX3P78415 501 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 AACSQ86V21 672 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 MAPKAPK5Q8IW41 473 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 RPAP2Q8IXW5 612 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ZNF687Q8N1G0 1237 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 CLASRPQ8N2M8 674 aaKnown RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ANKRD13CQ8N6S4 541 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 DPF3Q92784 378 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 HTATIP2Q9BUP3 242 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 BCL11AQ9H165 835 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 DDX19BQ9UMR2 479 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 PHIPQ8WWQ0 1821 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ZBED9Q6R2W3 1325 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 CDK5RAP2Q96SN8 1893 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 ATRNL1Q5VV63 1379 aa5.66□□□□□ -1.5
HERPUD1-213ENST00000568358 COL2A1P02458 1487 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 FOCADQ5VW36 1801 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 FAM196BA6NMK8 535 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 POM121CA8CG34 1229 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 USP17L10C9JJH3 530 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 RAB11FIP3O75154 756 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 TFRCP02786 760 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 POLR3DP05423 398 aaPredicted RBP5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 GJB1P08034 283 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 CCL5P13501 91 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 HMGCS2P54868 508 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 BACE1P56817 501 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 CAP1Q01518 475 aa5.65□□□□□ -1.5
HERPUD1-213ENST00000568358 PRKCZQ05513 592 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms