RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 COPRSQ9NQ92 184 aa12.23□□□□□ -0.45
PALB2-206ENST00000568219 ATP7BP35670 1465 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 KDRP35968 1356 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 MFAP3LO75121 409 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 MAP3K12Q12852 859 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 APOA5Q6Q788 366 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 SH2D3CQ8N5H7 860 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 MMS19Q96T76 1030 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 ANKZF1Q9H8Y5 726 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 BUB1O43683 1085 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
PALB2-206ENST00000568219 PPARAQ07869 468 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 N4BP2L2Q92802 583 aaPredicted RBP12.22□□□□□ -0.45
PALB2-206ENST00000568219 TRIM31Q9BZY9 425 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 BACH1O14867 736 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 KCNJ6P48051 423 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 MORC3Q14149 939 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 RSRC2Q7L4I2 434 aaKnown RBP12.22□□□□□ -0.45
PALB2-206ENST00000568219 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
PALB2-206ENST00000568219 SEPT11Q9NVA2 429 aaKnown RBP12.22□□□□□ -0.45
PALB2-206ENST00000568219 DENND2AQ9ULE3 1009 aa12.22□□□□□ -0.45
PALB2-206ENST00000568219 PPP6R2O75170 966 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 NDUFA10O95299 355 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 GLI2P10070 1586 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 CHRNA2Q15822 529 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 TSGA10IPQ3SY00 556 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 PIK3AP1Q6ZUJ8 805 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 CATIPQ7Z7H3 387 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 C2CD5Q86YS7 1000 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 FOXP4Q8IVH2 680 aaPredicted RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 CSGALNACT2Q8N6G5 542 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 MAGEB6Q8N7X4 407 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 UBLCP1Q8WVY7 318 aaPredicted RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 SYMPKQ92797 1274 aaKnown RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 ARMT1Q9H993 441 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 BABAM1Q9NWV8 329 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 MYO1FO00160 1098 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 MBD4O95243 580 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 A1BGP04217 495 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 ATP1A1P05023 1023 aaKnown RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 CCDC43Q96MW1 224 aaKnown RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 PANX2Q96RD6 677 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 TACO1Q9BSH4 297 aaKnown RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 LUC7LQ9NQ29 371 aaKnown RBP12.21□□□□□ -0.45
PALB2-206ENST00000568219 ADGRB2O60241 1585 aa12.21□□□□□ -0.45
PALB2-206ENST00000568219 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 ESYT3A0FGR9 886 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 CLGNO14967 610 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 COPB1P53618 953 aaKnown RBP12.21□□□□□ -0.46
PALB2-206ENST00000568219 ASIC1P78348 528 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.46
PALB2-206ENST00000568219 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.46
PALB2-206ENST00000568219 PSD3Q9NYI0 1048 aa12.21□□□□□ -0.46
PALB2-206ENST00000568219 GUCY2DQ02846 1103 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 RESP18Q5W5W9 173 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 KCNB2Q92953 911 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 HNRNPH1P31943 449 aaKnown RBP12.2□□□□□ -0.46
PALB2-206ENST00000568219 ARHGAP25P42331 645 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 IRAK1P51617 712 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 KRT31Q15323 416 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 SELENOSQ9BQE4 189 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
PALB2-206ENST00000568219 MAGEA1P43355 309 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 NNTQ13423 1086 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 IQCA1Q86XH1 822 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 IP6K1Q92551 441 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 SMARCAL1Q9NZC9 954 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 ZFYVE16Q7Z3T8 1539 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 ABL1P00519 1130 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 COG1Q8WTW3 980 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
PALB2-206ENST00000568219 TET3O43151 1660 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 KRT2P35908 639 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 KIRREL3Q8IZU9 778 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 NLRC4Q9NPP4 1024 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 RMND1Q9NWS8 449 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ZNF609O15014 1411 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 B4DLN1 442 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
PALB2-206ENST00000568219 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 SUFUQ9UMX1 484 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ZMYM6O95789 1325 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ERBB3P21860 1342 aa12.19□□□□□ -0.46
PALB2-206ENST00000568219 ZNF532Q9HCE3 1301 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms