RNA–Protein interactions for RNA: ENST00000568206.1

HERC2-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-210ENST00000568206 PGBD1Q96JS3 809 aa22.34■■□□□ 1.17
HERC2-210ENST00000568206 NAP1L5Q96NT1 182 aaPredicted RBP22.34■■□□□ 1.17
HERC2-210ENST00000568206 VPS33BQ9H267 617 aa22.34■■□□□ 1.17
HERC2-210ENST00000568206 SERPINA10Q9UK55 444 aa22.34■■□□□ 1.17
HERC2-210ENST00000568206 TGFB2P61812 414 aa22.33■■□□□ 1.17
HERC2-210ENST00000568206 PNMA1Q8ND90 353 aa22.33■■□□□ 1.17
HERC2-210ENST00000568206 KCNG4Q8TDN1 519 aa22.33■■□□□ 1.17
HERC2-210ENST00000568206 POLD1P28340 1107 aa22.33■■□□□ 1.16
HERC2-210ENST00000568206 NASPP49321 788 aaPredicted RBP22.33■■□□□ 1.16
HERC2-210ENST00000568206 FTOQ9C0B1 505 aaKnown RBP eCLIP22.33■■□□□ 1.16
HERC2-210ENST00000568206 OSBPL5Q9H0X9 879 aaPredicted RBP22.33■■□□□ 1.16
HERC2-210ENST00000568206 DDX19AQ9NUU7 478 aaKnown RBP22.33■■□□□ 1.16
HERC2-210ENST00000568206 PLEKHA8P1O95397 391 aa22.32■■□□□ 1.16
HERC2-210ENST00000568206 DDX4Q9NQI0 724 aaKnown RBP22.32■■□□□ 1.16
HERC2-210ENST00000568206 SWAP70Q9UH65 585 aa22.32■■□□□ 1.16
HERC2-210ENST00000568206 MYH6P13533 1939 aa22.32■■□□□ 1.16
HERC2-210ENST00000568206 ADAMTSL1Q8N6G6 1762 aa22.32■■□□□ 1.16
HERC2-210ENST00000568206 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 UBE2Q2LH0YL09 131 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 RRP9O43818 475 aaKnown RBP22.31■■□□□ 1.16
HERC2-210ENST00000568206 HLA-DOAP06340 250 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 GNAQP50148 359 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 GABPAQ06546 454 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 LINC00301Q8NCQ3 95 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
HERC2-210ENST00000568206 MTFR1LQ9H019 292 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 FOXP1Q9H334 677 aaPredicted RBP22.31■■□□□ 1.16
HERC2-210ENST00000568206 PLIN4Q96Q06 1357 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 CNTNAP5Q8WYK1 1306 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 ESPNB1AK53 854 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 STK38Q15208 465 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 SERPINB13Q9UIV8 391 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 STX8Q9UNK0 236 aa22.31■■□□□ 1.16
HERC2-210ENST00000568206 LIG1P18858 919 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 ME1P48163 572 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 ANO1Q5XXA6 986 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 TSPY26PQ9H489 355 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 TAOK2Q9UL54 1235 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 NPM3O75607 178 aaKnown RBP22.3■■□□□ 1.16
HERC2-210ENST00000568206 RBM5P52756 815 aaKnown RBP eCLIP22.3■■□□□ 1.16
HERC2-210ENST00000568206 SF3A1Q15459 793 aaKnown RBP22.3■■□□□ 1.16
HERC2-210ENST00000568206 PKN1Q16512 942 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 NOSTRINQ8IVI9 506 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 DIS3L2Q8IYB7 885 aaKnown RBP22.3■■□□□ 1.16
HERC2-210ENST00000568206 NUP62CLQ9H1M0 184 aa22.3■■□□□ 1.16
HERC2-210ENST00000568206 V9GY48 417 aaPredicted RBP22.3■■□□□ 1.16
HERC2-210ENST00000568206 PSME4Q14997 1843 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 ZBTB7AO95365 584 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 GRM4Q14833 912 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 SRBD1Q8N5C6 995 aaKnown RBP22.29■■□□□ 1.16
HERC2-210ENST00000568206 TMEM47Q9BQJ4 181 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 IDI2Q9BXS1 227 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 PIM2Q9P1W9 311 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 CLIC4Q9Y696 253 aa22.29■■□□□ 1.16
HERC2-210ENST00000568206 YDJCA8MPS7 323 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 EHD4Q9H223 541 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 DHX36Q9H2U1 1008 aaKnown RBP22.28■■□□□ 1.16
HERC2-210ENST00000568206 DACT1Q9NYF0 836 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 SPTLC2O15270 562 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 NOVP48745 357 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 ADALQ6DHV7 355 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 LZTS2Q9BRK4 669 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 KCNJ14Q9UNX9 436 aa22.28■■□□□ 1.16
HERC2-210ENST00000568206 A0A1W2PQ27 194 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 A0A1W2PQ64 194 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 A0A1W2PQD8 194 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 BTBD18B2RXH4 712 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 TOP1P11387 765 aaKnown RBP22.26■■□□□ 1.15
HERC2-210ENST00000568206 CCDC73Q6ZRK6 1079 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
HERC2-210ENST00000568206 JMYQ8N9B5 988 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 BRMS1Q9HCU9 246 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 PCDHA7Q9UN72 937 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 NFIAQ12857 509 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 SLC39A14Q15043 492 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 TRIM44Q96DX7 344 aaPredicted RBP22.26■■□□□ 1.15
HERC2-210ENST00000568206 CEP95Q96GE4 821 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 PHF20Q9BVI0 1012 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 RBSNQ9H1K0 784 aa22.26■■□□□ 1.15
HERC2-210ENST00000568206 NR1I2O75469 434 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 SCG2P13521 617 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 MAP3K11Q16584 847 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 RILPL1Q5EBL4 403 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 RSBN1LQ6PCB5 846 aaPredicted RBP22.25■■□□□ 1.15
HERC2-210ENST00000568206 ANP32BQ92688 251 aaKnown RBP22.25■■□□□ 1.15
HERC2-210ENST00000568206 CLSTN2Q9H4D0 955 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 VPS54Q9P1Q0 977 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 MAD2L2Q9UI95 211 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 MYH8P13535 1937 aa22.25■■□□□ 1.15
HERC2-210ENST00000568206 PFKFB3Q16875 520 aaPredicted RBP22.24■■□□□ 1.15
HERC2-210ENST00000568206 PPP4R3BQ5MIZ7 849 aa22.24■■□□□ 1.15
HERC2-210ENST00000568206 TNMDQ9H2S6 317 aa22.24■■□□□ 1.15
HERC2-210ENST00000568206 ZNF277Q9NRM2 450 aaPredicted RBP22.24■■□□□ 1.15
HERC2-210ENST00000568206 ATF5Q9Y2D1 282 aaPredicted RBP22.24■■□□□ 1.15
HERC2-210ENST00000568206 PPP6R2O75170 966 aa22.24■■□□□ 1.15
HERC2-210ENST00000568206 KRT2P35908 639 aa22.24■■□□□ 1.15
HERC2-210ENST00000568206 DALRD3Q5D0E6 543 aaKnown RBP22.24■■□□□ 1.15
HERC2-210ENST00000568206 MRPS27Q92552 414 aaKnown RBP22.24■■□□□ 1.15
HERC2-210ENST00000568206 PALM3A6NDB9 673 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms