RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 EYA2O00167 538 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 KCNA3P22001 575 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 ALDH1B1P30837 517 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 NLGN2Q8NFZ4 835 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 NDFIP2Q9NV92 336 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 DNAAF2Q9NVR5 837 aaKnown RBP9.55□□□□□ -0.88
SMG1-214ENST00000568038 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
SMG1-214ENST00000568038 DNMT3AQ9Y6K1 912 aaPredicted RBP9.55□□□□□ -0.88
SMG1-214ENST00000568038 COL4A1P02462 1669 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 COL11A2P13942 1736 aaPredicted RBP9.54□□□□□ -0.88
SMG1-214ENST00000568038 PHF20L1A8MW92 1017 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 KHNYNO15037 678 aaKnown RBP9.54□□□□□ -0.88
SMG1-214ENST00000568038 BBOX1O75936 387 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 C1orf229Q6ZS94 237 aaPredicted RBP9.54□□□□□ -0.88
SMG1-214ENST00000568038 SLC51AQ86UW1 340 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 NLRP8Q86W28 1048 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 ZNF295-AS1Q8N0V1 137 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 DCTPP1Q9H773 170 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 BSDC1Q9NW68 430 aaPredicted RBP9.54□□□□□ -0.88
SMG1-214ENST00000568038 PIM2Q9P1W9 311 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 NOP58Q9Y2X3 529 aaKnown RBP9.54□□□□□ -0.88
SMG1-214ENST00000568038 KIF13BQ9NQT8 1826 aa9.54□□□□□ -0.88
SMG1-214ENST00000568038 ATP9BO43861 1147 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 TXLNAP40222 546 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 IL15P40933 162 aaPredicted RBP9.53□□□□□ -0.88
SMG1-214ENST00000568038 HSP90AB4PQ58FF6 505 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 METTL24Q5JXM2 366 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 GPAT2Q6NUI2 795 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 PRPF40BQ6NWY9 871 aaKnown RBP9.53□□□□□ -0.88
SMG1-214ENST00000568038 OLFM4Q6UX06 510 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 ATG9AQ7Z3C6 839 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 GCC1Q96CN9 775 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 SYT17Q9BSW7 474 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 GDF2Q9UK05 429 aaPredicted RBP9.53□□□□□ -0.88
SMG1-214ENST00000568038 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 KIAA1024Q9UPX6 916 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 RIPOR2Q9Y4F9 1068 aa9.53□□□□□ -0.88
SMG1-214ENST00000568038 SPEF2Q9C093 1822 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 C21orf2O43822 256 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 SMARCA5O60264 1052 aaPredicted RBP9.52□□□□□ -0.89
SMG1-214ENST00000568038 RAB11FIP3O75154 756 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 TAF5LO75529 589 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 CIAO1O76071 339 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 SASH1O94885 1247 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 CD33P20138 364 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 AMPD1P23109 780 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 CHRNDQ07001 517 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 TFCP2Q12800 502 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
SMG1-214ENST00000568038 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 ERICH6Q7L0X2 663 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 ERC1Q8IUD2 1116 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 SLC9A9Q8IVB4 645 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 SP8Q8IXZ3 490 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 RHPN1Q8TCX5 695 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
SMG1-214ENST00000568038 IL1RAPL2Q9NP60 686 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 ZDHHC3Q9NYG2 299 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 MKRN1Q9UHC7 482 aaKnown RBP9.52□□□□□ -0.89
SMG1-214ENST00000568038 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.52□□□□□ -0.89
SMG1-214ENST00000568038 SLX4Q8IY92 1834 aa9.52□□□□□ -0.89
SMG1-214ENST00000568038 MAPTP10636 758 aaKnown RBP9.51□□□□□ -0.89
SMG1-214ENST00000568038 NOS2P35228 1153 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 SNRPNP63162 240 aaKnown RBP9.51□□□□□ -0.89
SMG1-214ENST00000568038 CLDN10P78369 228 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 GPSM2P81274 684 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 CENPQQ7L2Z9 268 aaPredicted RBP9.51□□□□□ -0.89
SMG1-214ENST00000568038 TMC4Q7Z404 712 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 PLEKHM2Q8IWE5 1019 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 SMC5Q8IY18 1101 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 ZDHHC1Q8WTX9 485 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 KIF1BPQ96EK5 621 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 ANKIB1Q9P2G1 1089 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 MROH5Q6ZUA9 1318 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 KDM2BQ8NHM5 1336 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 CACNA1SQ13698 1873 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
SMG1-214ENST00000568038 SNAP23O00161 211 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 TNP2Q05952 138 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 C7orf43Q8WVR3 580 aa9.5□□□□□ -0.89
SMG1-214ENST00000568038 GLMNQ92990 594 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms