RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 AMOTL1Q8IY63 956 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 EHD4Q9H223 541 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 SLC4A4Q9Y6R1 1079 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
LINC01228-201ENST00000567966 GSG1L2A8MUP6 293 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 GNRH1P01148 92 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 CHGBP05060 677 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 CHMLP26374 656 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 MTFR1Q15390 333 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 SLFNL1Q499Z3 407 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 SAP30BPQ9UHR5 308 aaKnown RBP13.19□□□□□ -0.3
LINC01228-201ENST00000567966 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
LINC01228-201ENST00000567966 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 RAD50Q92878 1312 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 M0R2C6 588 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
LINC01228-201ENST00000567966 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
LINC01228-201ENST00000567966 PRMT2P55345 433 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 PRKCZQ05513 592 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
LINC01228-201ENST00000567966 CASC1Q6TDU7 716 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
LINC01228-201ENST00000567966 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 SLC45A1Q9Y2W3 748 aa13.18□□□□□ -0.3
LINC01228-201ENST00000567966 MYH1P12882 1939 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 USP17L5A8MUK1 530 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 PRKAB2O43741 272 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 APPP05067 770 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 GRK4P32298 578 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 HMGCS2P54868 508 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 FCGRTP55899 365 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
LINC01228-201ENST00000567966 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 SDR42E1Q8WUS8 393 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
LINC01228-201ENST00000567966 SERPINB13Q9UIV8 391 aa13.17□□□□□ -0.3
LINC01228-201ENST00000567966 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 USP17L21D6R901 530 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
LINC01228-201ENST00000567966 GDF11O95390 407 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 HOXD10P28358 340 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
LINC01228-201ENST00000567966 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
LINC01228-201ENST00000567966 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
LINC01228-201ENST00000567966 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
LINC01228-201ENST00000567966 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 SGSM2O43147 1006 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 SLC3A2P08195 630 aaKnown RBP13.15□□□□□ -0.3
LINC01228-201ENST00000567966 HSPD1P10809 573 aaKnown RBP13.15□□□□□ -0.3
LINC01228-201ENST00000567966 NT5C2P49902 561 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 GABPAQ06546 454 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 SH3D19Q5HYK7 790 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
LINC01228-201ENST00000567966 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 NAPBQ9H115 298 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 DOCK3Q8IZD9 2030 aa13.15□□□□□ -0.3
LINC01228-201ENST00000567966 PEX10O60683 326 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 CDC45O75419 566 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 FGAP02671 866 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 CCL5P13501 91 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 ELNP15502 786 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 TDO2P48775 406 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 FLT3LGP49771 235 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
LINC01228-201ENST00000567966 PLCD1P51178 756 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 MTMR2Q13614 643 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 ASCC2Q9H1I8 757 aaPredicted RBP13.14□□□□□ -0.31
LINC01228-201ENST00000567966 ANAPC4Q9UJX5 808 aa13.14□□□□□ -0.31
LINC01228-201ENST00000567966 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
LINC01228-201ENST00000567966 ASNSP08243 561 aa13.13□□□□□ -0.31
LINC01228-201ENST00000567966 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
LINC01228-201ENST00000567966 EVX2Q03828 476 aa13.13□□□□□ -0.31
LINC01228-201ENST00000567966 CCDC129Q6ZRS4 1044 aa13.13□□□□□ -0.31
LINC01228-201ENST00000567966 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
LINC01228-201ENST00000567966 ZNF589Q86UQ0 364 aaPredicted RBP13.13□□□□□ -0.31
LINC01228-201ENST00000567966 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
LINC01228-201ENST00000567966 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms