RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
CAPN3-217ENST00000567817 SAMM50Q9Y512 469 aa7.21□□□□□ -1.26
CAPN3-217ENST00000567817 ACTL7BQ9Y614 415 aa7.21□□□□□ -1.26
CAPN3-217ENST00000567817 PNPLA6Q8IY17 1366 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 UNC13BO14795 1591 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ABCC5O15440 1437 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ADGRL2O95490 1459 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
CAPN3-217ENST00000567817 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ENC1O14682 589 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ARNTP27540 789 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 KIF4BQ2VIQ3 1234 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 CDPF1Q6NVV7 123 aa7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.2□□□□□ -1.26
CAPN3-217ENST00000567817 DUSP9Q99956 384 aaKnown RBP7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
CAPN3-217ENST00000567817 GSX1Q9H4S2 264 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-217ENST00000567817 ATRNO75882 1429 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 ZFYVE9O95405 1425 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 NOS1P29475 1434 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 EP400Q96L91 3159 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 FAM95CA0A1B0GW59 222 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 TMPRSS2O15393 492 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 ZNF862O60290 1169 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 LIG1P18858 919 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 DDX10Q13206 875 aaKnown RBP7.19□□□□□ -1.26
CAPN3-217ENST00000567817 IDI1Q13907 227 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 PAOXQ6QHF9 649 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 DYMQ7RTS9 669 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 STK35Q8TDR2 534 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 FBLIM1Q8WUP2 373 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 AK5Q9Y6K8 562 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 ANKRD30AQ9BXX3 1397 aa7.19□□□□□ -1.26
CAPN3-217ENST00000567817 SPHKAPQ2M3C7 1700 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 FBXO24O75426 580 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 SLFN14P0C7P3 912 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 ZNF252P-AS1Q0IIN9 211 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 LRP8Q14114 963 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 FBXO33Q7Z6M2 555 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 ZDHHC13Q8IUH4 622 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 HOMEZQ8IX15 550 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 Q8N3U1 123 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 KCNB2Q92953 911 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 ATXN3LQ9H3M9 355 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 ACSS3Q9H6R3 686 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 RRP7BPQ9NSQ0 103 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 FAM105AQ9NUU6 356 aa7.18□□□□□ -1.26
CAPN3-217ENST00000567817 TRPM2O94759 1503 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 CFAP65Q6ZU64 1925 aaKnown RBP7.17□□□□□ -1.26
CAPN3-217ENST00000567817 LAMC1P11047 1609 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 ASPAP45381 313 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 ID3Q02535 119 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 MAP7Q14244 749 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 WDR89Q96FK6 387 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-217ENST00000567817 CBX8Q9HC52 389 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 PPP1R9AQ9ULJ8 1098 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 TTF2Q9UNY4 1162 aaKnown RBP7.17□□□□□ -1.26
CAPN3-217ENST00000567817 PCDHGC5Q9Y5F6 944 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 ANKRD30BQ9BXX2 1392 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 MST1RQ04912 1400 aa7.17□□□□□ -1.26
CAPN3-217ENST00000567817 ZBTB7CA1YPR0 619 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 RAB6AP20340 208 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 BMP6P22004 513 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 DAB2P98082 770 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 LRRC14Q15048 493 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 ARTNQ5T4W7 220 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 MAP1SQ66K74 1059 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-217ENST00000567817 SCARA3Q6AZY7 606 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 SV2BQ7L1I2 683 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 GIMAP7Q8NHV1 300 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 SEMA6CQ9H3T2 930 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 PARP2Q9UGN5 583 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 KIF15Q9NS87 1388 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 RIMS2Q9UQ26 1411 aa7.16□□□□□ -1.26
CAPN3-217ENST00000567817 PAGE1O75459 146 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 TRIM37O94972 964 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 CELA3AP09093 270 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 YY1P25490 414 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-217ENST00000567817 PSMD2Q13200 908 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
CAPN3-217ENST00000567817 LLGL2Q6P1M3 1020 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 TMC4Q7Z404 712 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 SHKBP1Q8TBC3 707 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 GPBAR1Q8TDU6 330 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 MFSD14AQ96MC6 490 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 RNF19AQ9NV58 838 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 CYP8B1Q9UNU6 501 aa7.15□□□□□ -1.26
CAPN3-217ENST00000567817 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.26
CAPN3-217ENST00000567817 ADAMTS13Q76LX8 1427 aa7.15□□□□□ -1.27
CAPN3-217ENST00000567817 BCL9LQ86UU0 1499 aa7.15□□□□□ -1.27
CAPN3-217ENST00000567817 TGFB1P01137 390 aa7.14□□□□□ -1.27
CAPN3-217ENST00000567817 NFICP08651 508 aa7.14□□□□□ -1.27
CAPN3-217ENST00000567817 PCNX4Q63HM2 1172 aa7.14□□□□□ -1.27
CAPN3-217ENST00000567817 COL22A1Q8NFW1 1626 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms