RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 PARP14Q460N5 1801 aa18.2■□□□□ 0.5
SCAMP2-209ENST00000567638 RLFQ13129 1914 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 A0A0G2JMZ2 1700 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 FARP2O94887 1054 aaPredicted RBP18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 MBD4O95243 580 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 CAPN2P17655 700 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 ERVK-24P63145 666 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 HABP4Q5JVS0 413 aaKnown RBP18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 ACER1Q8TDN7 264 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 DEFB118Q96PH6 123 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 FRMPD3Q5JV73 1810 aa18.19■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L15C9J2P7 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L13C9JLJ4 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L11C9JVI0 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L18D6R9N7 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L22D6RA61 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L17D6RBQ6 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L19D6RCP7 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L20D6RJB6 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 SMARCA5O60264 1052 aaPredicted RBP18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 CYP2D6P10635 497 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 VCAM1P19320 739 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 MAPK4P31152 587 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 USP17L24Q0WX57 530 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 SEPT2Q15019 361 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 POTEEQ6S8J3 1075 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 SOCS4Q8WXH5 440 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 PAGR1Q9BTK6 254 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 HTATIP2Q9BUP3 242 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 CEP290O15078 2479 aa18.18■□□□□ 0.5
SCAMP2-209ENST00000567638 H0YGN5 161 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 UBE3CQ15386 1083 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 Q3C1V9 767 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 TRIB2Q92519 343 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 DPF3Q92784 378 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 NUDT12Q9BQG2 462 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 CRISPLD2Q9H0B8 497 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 PORCNQ9H237 461 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 ATP8A2Q9NTI2 1148 aa18.17■□□□□ 0.5
SCAMP2-209ENST00000567638 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 PRKAB2O43741 272 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 TFRCP02786 760 aaKnown RBP18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 CHGBP05060 677 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 CYP2B6P20813 491 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 TRIM32Q13049 653 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 SLC44A5Q8NCS7 719 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 SWAP70Q9UH65 585 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
SCAMP2-209ENST00000567638 CNMDO75829 334 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 ZSCAN25Q6NSZ9 544 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 LBX2Q6XYB7 198 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 TMEM179Q6ZVK1 233 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 GPR142Q7Z601 462 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 RPAP3Q9H6T3 665 aaPredicted RBP18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 HMX1Q9NP08 348 aaPredicted RBP18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 ECHDC1Q9NTX5 307 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 RPTORQ8N122 1335 aa18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 GREB1LQ9C091 1923 aaPredicted RBP18.15■□□□□ 0.5
SCAMP2-209ENST00000567638 COL11A1P12107 1806 aaPredicted RBP18.14■□□□□ 0.5
SCAMP2-209ENST00000567638 ZNF236Q9UL36 1845 aa18.14■□□□□ 0.5
SCAMP2-209ENST00000567638 A0A1W2PRG0 241 aa18.14■□□□□ 0.49
SCAMP2-209ENST00000567638 PLEKHH3Q7Z736 793 aa18.14■□□□□ 0.49
SCAMP2-209ENST00000567638 USP6NLQ92738 828 aa18.14■□□□□ 0.49
SCAMP2-209ENST00000567638 DYNLL2Q96FJ2 89 aa18.14■□□□□ 0.49
SCAMP2-209ENST00000567638 COLQQ9Y215 455 aaPredicted RBP18.14■□□□□ 0.49
SCAMP2-209ENST00000567638 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 RGS2P41220 211 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 CCNA1P78396 465 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 MORN1Q5T089 497 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 MAP3K21Q5TCX8 1036 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 C12orf60Q5U649 245 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 AMOTL1Q8IY63 956 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 TRMT44Q8IYL2 757 aaKnown RBP18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 APBA2Q99767 749 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 SLC4A4Q9Y6R1 1079 aa18.13■□□□□ 0.49
SCAMP2-209ENST00000567638 CYP2D7A0A087X1C5 515 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 USP17L21D6R901 530 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 PRKAR2AP13861 404 aaKnown RBP18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 AKR1B1P15121 316 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 PUS7LQ9H0K6 701 aaKnown RBP18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 BTBD7Q9P203 1132 aa18.12■□□□□ 0.49
SCAMP2-209ENST00000567638 SMIM22K7EJ46 135 aa18.11■□□□□ 0.49
SCAMP2-209ENST00000567638 GLRX3O76003 335 aaKnown RBP18.11■□□□□ 0.49
SCAMP2-209ENST00000567638 CDK8P49336 464 aa18.11■□□□□ 0.49
SCAMP2-209ENST00000567638 C16orf86Q6ZW13 317 aa18.11■□□□□ 0.49
SCAMP2-209ENST00000567638 CLEC10AQ8IUN9 316 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms