RNA–Protein interactions for RNA: ENST00000567547.1

NEIL1-214, Transcript of nei like DNA glycosylase 1, human

TSL 2

Gene NEIL1, Length 725 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-214	ENST00000567547	NMT2	O60551	498 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	CCT2	P78371	535 aa	Known RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	TROAP	Q12815	778 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	RTN1	Q16799	776 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	CERKL	Q49MI3	558 aa	Predicted RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	ANGEL2	Q5VTE6	544 aa	Known RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	TMEM179	Q6ZVK1	233 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	USP50	Q70EL3	339 aa	Predicted RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	NSUN7	Q8NE18	718 aa	Known RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	CEP95	Q96GE4	821 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	DEFB129	Q9H1M3	183 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	RBM28	Q9NW13	759 aa	Known RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	MTMR4	Q9NYA4	1195 aa		13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	ASTN2	O75129	1339 aa	Predicted RBP	13.08	□□□□□ -0.32
NEIL1-214	ENST00000567547	PTPDC1	A2A3K4	754 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	CTDNEP1	O95476	244 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	TOP1	P11387	765 aa	Known RBP	13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	PDC	P20941	246 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	GJB2	P29033	226 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	HIRA	P54198	1017 aa	Predicted RBP	13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	PNMA1	Q8ND90	353 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	ZC3H15	Q8WU90	426 aa	Known RBP	13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	NCOA5	Q9HCD5	579 aa	Known RBP	13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	GINM1	Q9NU53	330 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	SYNPO2	Q9UMS6	1093 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	STK36	Q9NRP7	1315 aa		13.07	□□□□□ -0.32
NEIL1-214	ENST00000567547	GOLGB1	Q14789	3259 aa	Known RBP	13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	FAM196B	A6NMK8	535 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	TTLL1	O95922	423 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	IFNAR1	P17181	557 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	EPHX2	P34913	555 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	ABCB5	Q2M3G0	1257 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	DCAF15	Q66K64	600 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	FANCB	Q8NB91	859 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	RGS22	Q8NE09	1264 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	CTCFL	Q8NI51	663 aa	Predicted RBP	13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	TMEM47	Q9BQJ4	181 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	MYL10	Q9BUA6	226 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	KANSL2	Q9H9L4	492 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	CABP5	Q9NP86	173 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	NYAP2	Q9P242	653 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	STX8	Q9UNK0	236 aa		13.06	□□□□□ -0.32
NEIL1-214	ENST00000567547	MYH4	Q9Y623	1939 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	MPHOSPH10	O00566	681 aa	Known RBP	13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	JAK2	O60674	1132 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	RXRA	P19793	462 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	CDC27	P30260	824 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	KIF5B	P33176	963 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	GRM4	Q14833	912 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	RAB3GAP1	Q15042	981 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	NTRK3	Q16288	839 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	RAB11FIP4	Q86YS3	637 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	CDAN1	Q8IWY9	1227 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	NUP133	Q8WUM0	1156 aa		13.05	□□□□□ -0.32
NEIL1-214	ENST00000567547	ATAD5	Q96QE3	1844 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	DCAF8L1	A6NGE4	600 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	SLURP2	P0DP57	97 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	GUCY1A2	P33402	732 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	GNAQ	P50148	359 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	ICA1	Q05084	483 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	FAM184A	Q8NB25	1140 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	MKL1	Q969V6	931 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	DCPS	Q96C86	337 aa	Known RBP	13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	ZBTB21	Q9ULJ3	1066 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	WDR33	Q9C0J8	1336 aa	Known RBP	13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	DOCK1	Q14185	1865 aa		13.04	□□□□□ -0.32
NEIL1-214	ENST00000567547	STX6	O43752	255 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	FMNL1	O95466	1100 aa	Predicted RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	BRD1	O95696	1058 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	GH2	P01242	217 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	SYT1	P21579	422 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	ADD1	P35611	737 aa	Known RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	CAP2	P40123	477 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	RRP1B	Q14684	758 aa	Known RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	SUPT20HL1	Q3ZLR7	823 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	TMTC3	Q6ZXV5	915 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	PNMA8A	Q86V59	439 aa	Predicted RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	SULF1	Q8IWU6	871 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	CCDC144CP	Q8IYA2	1237 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	TRIM22	Q8IYM9	498 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	WASF1	Q92558	559 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	LZTS2	Q9BRK4	669 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	RNF26	Q9BY78	433 aa	Predicted RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	ZNF341	Q9BYN7	854 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	RBM27	Q9P2N5	1060 aa	Known RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	ORC3	Q9UBD5	711 aa	Predicted RBP	13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	SSC5D	A1L4H1	1573 aa		13.03	□□□□□ -0.32
NEIL1-214	ENST00000567547	PHF20L1	A8MW92	1017 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	GDF11	O95390	407 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	ASNS	P08243	561 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	SNHG28	P0DPA3	235 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	FDPS	P14324	419 aa	Known RBP	13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	SMARCA1	P28370	1054 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	FUT2	Q10981	343 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	SEPT2	Q15019	361 aa		13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.02	□□□□□ -0.33
NEIL1-214	ENST00000567547	MIGA2	Q7L4E1	593 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms