RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PHF24Q9UPV7 400 aa12.16□□□□□ -0.46
CAPN3-216ENST00000567071 ZNF318Q5VUA4 2279 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-216ENST00000567071 TBC1D12O60347 775 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 SLC5A1P13866 664 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 PTPREP23469 700 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 GNAI1P63096 354 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 CALD1Q05682 793 aaKnown RBP12.15□□□□□ -0.46
CAPN3-216ENST00000567071 PICALMQ13492 652 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 MTMR2Q13614 643 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 DPP9Q86TI2 863 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 GJD3Q8N144 294 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 TOX2Q96NM4 488 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 NDUFB9Q9Y6M9 179 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 BRWD1Q9NSI6 2320 aa12.15□□□□□ -0.46
CAPN3-216ENST00000567071 C19orf81C9J6K1 198 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
CAPN3-216ENST00000567071 BACE1P56817 501 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 FAAP100Q0VG06 881 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 METTL24Q5JXM2 366 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 DNAAF4Q8WXU2 420 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 XPNPEP3Q9NQH7 507 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 SLC5A4Q9NY91 659 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
CAPN3-216ENST00000567071 RABGAP1Q9Y3P9 1069 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
CAPN3-216ENST00000567071 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-216ENST00000567071 MROH7Q68CQ1 1323 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-216ENST00000567071 RARBP10826 455 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 CSF2RAP15509 400 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 POU3F3P20264 500 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-216ENST00000567071 CAP2P40123 477 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 GRB14Q14449 540 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 OLFML2BQ68BL8 750 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 NPLOC4Q8TAT6 608 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 NUP133Q8WUM0 1156 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 WDR18Q9BV38 432 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 USP34Q70CQ2 3546 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
CAPN3-216ENST00000567071 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 A0A0G2JMZ2 1700 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 A0A1W2PQ45 241 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-216ENST00000567071 A0A1W2PQY0 241 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 ACRP10323 421 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 PRDX5P30044 214 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 PTPN5P54829 565 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 FKBP5Q13451 457 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-216ENST00000567071 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
CAPN3-216ENST00000567071 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 PCDHA11Q9Y5I1 949 aa12.12□□□□□ -0.47
CAPN3-216ENST00000567071 FAM196BA6NMK8 535 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 USP17L10C9JJH3 530 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 DCXO43602 365 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 GFRA3O60609 400 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 FGBP02675 491 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 PRRX2Q99811 253 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 TBX21Q9UL17 535 aa12.11□□□□□ -0.47
CAPN3-216ENST00000567071 RFX7Q2KHR2 1363 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 PDE8BO95263 885 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 ASNSP08243 561 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 FAM178BQ8IXR5 827 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
CAPN3-216ENST00000567071 TLR3O15455 904 aaKnown RBP12.09□□□□□ -0.47
CAPN3-216ENST00000567071 FLIIQ13045 1269 aa12.09□□□□□ -0.47
CAPN3-216ENST00000567071 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
CAPN3-216ENST00000567071 DZIP1Q86YF9 867 aaKnown RBP12.09□□□□□ -0.47
CAPN3-216ENST00000567071 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
CAPN3-216ENST00000567071 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
CAPN3-216ENST00000567071 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
CAPN3-216ENST00000567071 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
CAPN3-216ENST00000567071 STRNO43815 780 aa12.08□□□□□ -0.48
CAPN3-216ENST00000567071 ADORA2AP29274 412 aa12.08□□□□□ -0.48
CAPN3-216ENST00000567071 RABGGTBP53611 331 aa12.08□□□□□ -0.48
CAPN3-216ENST00000567071 G2E3Q7L622 706 aa12.08□□□□□ -0.48
CAPN3-216ENST00000567071 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
CAPN3-216ENST00000567071 PPP1R12CQ9BZL4 782 aa12.08□□□□□ -0.48
CAPN3-216ENST00000567071 C9orf78Q9NZ63 289 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-216ENST00000567071 HERC5Q9UII4 1024 aaKnown RBP12.08□□□□□ -0.48
CAPN3-216ENST00000567071 ZNF236Q9UL36 1845 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms