RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TRIOBPQ9H2D6 2365 aa19.83■□□□□ 0.76
CLN6-208ENST00000567060 DOCK1Q14185 1865 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 MYCP01106 439 aaPredicted RBP19.82■□□□□ 0.76
CLN6-208ENST00000567060 CYP2D6P10635 497 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 SHMT1P34896 483 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 CDK8P49336 464 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 CERKLQ49MI3 558 aaPredicted RBP19.82■□□□□ 0.76
CLN6-208ENST00000567060 OTUD5Q96G74 571 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 LSG1Q9H089 658 aaKnown RBP19.82■□□□□ 0.76
CLN6-208ENST00000567060 ANO2Q9NQ90 1003 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 PICK1Q9NRD5 415 aa19.82■□□□□ 0.76
CLN6-208ENST00000567060 H0YGN5 161 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 SLC4A8Q2Y0W8 1093 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 ERO1BQ86YB8 467 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 SH3TC2Q8TF17 1288 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 STAG1Q8WVM7 1258 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 MKNK2Q9HBH9 465 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 CABP5Q9NP86 173 aa19.81■□□□□ 0.76
CLN6-208ENST00000567060 CYP2D7A0A087X1C5 515 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 SPDYE5A6NIY4 337 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 ORC4O43929 436 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 TLR2O60603 784 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 INPP5BP32019 993 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 PTH1RQ03431 593 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 PPATQ06203 517 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 PPP4R3BQ5MIZ7 849 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 RNF20Q5VTR2 975 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 SNCAIPQ9Y6H5 919 aa19.8■□□□□ 0.76
CLN6-208ENST00000567060 BTBD19C9JJ37 291 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 LACTBP83111 547 aaPredicted RBP19.79■□□□□ 0.76
CLN6-208ENST00000567060 ABCB5Q2M3G0 1257 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 AKNAD1Q5T1N1 836 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 TMEM179Q6ZVK1 233 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 ZNF444Q8N0Y2 327 aaPredicted RBP19.79■□□□□ 0.76
CLN6-208ENST00000567060 DYNLL2Q96FJ2 89 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 CNNM2Q9H8M5 875 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 AS3MTQ9HBK9 375 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.79■□□□□ 0.767e-6■■■■■ 33.6
CLN6-208ENST00000567060 RBM8AQ9Y5S9 174 aaKnown RBP19.79■□□□□ 0.76
CLN6-208ENST00000567060 ATAD5Q96QE3 1844 aa19.79■□□□□ 0.76
CLN6-208ENST00000567060 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
CLN6-208ENST00000567060 MFSD6Q6ZSS7 791 aa19.78■□□□□ 0.76
CLN6-208ENST00000567060 ZKSCAN4Q969J2 545 aaPredicted RBP19.78■□□□□ 0.76
CLN6-208ENST00000567060 ZBTB21Q9ULJ3 1066 aa19.78■□□□□ 0.76
CLN6-208ENST00000567060 ZSWIM8A7E2V4 1837 aa19.78■□□□□ 0.76
CLN6-208ENST00000567060 USP17L5A8MUK1 530 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 IRF6O14896 467 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 PTPRAP18433 802 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 CTGFP29279 349 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 PPIL2Q13356 520 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 NECTIN1Q15223 517 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 KRT23Q9C075 422 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 PLIN4Q96Q06 1357 aa19.77■□□□□ 0.76
CLN6-208ENST00000567060 CETPP11597 493 aa19.76■□□□□ 0.75
CLN6-208ENST00000567060 RASA1P20936 1047 aa19.76■□□□□ 0.75
CLN6-208ENST00000567060 SLC44A5Q8NCS7 719 aa19.76■□□□□ 0.75
CLN6-208ENST00000567060 WDR18Q9BV38 432 aa19.76■□□□□ 0.75
CLN6-208ENST00000567060 ZCCHC17Q9NP64 241 aaKnown RBP19.76■□□□□ 0.75
CLN6-208ENST00000567060 SYNPO2Q9UMS6 1093 aa19.76■□□□□ 0.75
CLN6-208ENST00000567060 CXCL11O14625 94 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 CYP21A2P08686 494 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 EVX2Q03828 476 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 CTDSPL2Q05D32 466 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 TRDNQ13061 729 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 MTFR1Q15390 333 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 CCDC178Q5BJE1 867 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 C17orf99Q6UX52 265 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 NEDD1Q8NHV4 660 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 ESR2Q92731 530 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 SHISA4Q96DD7 197 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 KANSL2Q9H9L4 492 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 KCNH4Q9UQ05 1017 aa19.75■□□□□ 0.75
CLN6-208ENST00000567060 GREB1LQ9C091 1923 aaPredicted RBP19.74■□□□□ 0.75
CLN6-208ENST00000567060 GH2P01242 217 aa19.74■□□□□ 0.75
CLN6-208ENST00000567060 ZKSCAN1P17029 563 aaPredicted RBP19.74■□□□□ 0.75
CLN6-208ENST00000567060 MCCP23508 829 aa19.74■□□□□ 0.75
CLN6-208ENST00000567060 HAND2P61296 217 aa19.74■□□□□ 0.75
CLN6-208ENST00000567060 KRT32Q14532 448 aa19.74■□□□□ 0.75
CLN6-208ENST00000567060 RRP1BQ14684 758 aaKnown RBP19.74■□□□□ 0.75
CLN6-208ENST00000567060 A0A0C4DFX4 3053 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 MPHOSPH10O00566 681 aaKnown RBP19.73■□□□□ 0.75
CLN6-208ENST00000567060 ECM2O94769 699 aaPredicted RBP19.73■□□□□ 0.75
CLN6-208ENST00000567060 GDF11O95390 407 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 GNRH1P01148 92 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 TSPY3P0CV98 308 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 TSPY8P0CW00 308 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 SLURP2P0DP57 97 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 SNAPC2Q13487 334 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 KIF22Q14807 665 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 CREB3L3Q68CJ9 461 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 CHRDL2Q6WN34 429 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 TBC1D10CQ8IV04 446 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 ZNF280CQ8ND82 737 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 NBPF3Q9H094 633 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 SH2D4AQ9H788 454 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 TCP11L1Q9NUJ3 509 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 AFG3L2Q9Y4W6 797 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 ZHX2Q9Y6X8 837 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms