RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 PUS7LQ9H0K6 701 aaKnown RBP22.55■■□□□ 1.2
IFT140-208ENST00000566818 USP17L15C9J2P7 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L13C9JLJ4 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L11C9JVI0 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L18D6R9N7 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L22D6RA61 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L17D6RBQ6 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L19D6RCP7 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L20D6RJB6 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 GLRX3O76003 335 aaKnown RBP22.54■■□□□ 1.2
IFT140-208ENST00000566818 CHGBP05060 677 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 EVX2Q03828 476 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 USP17L24Q0WX57 530 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 AAMPQ13685 434 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 PRPF38BQ5VTL8 546 aaKnown RBP22.54■■□□□ 1.2
IFT140-208ENST00000566818 GPRC5AQ8NFJ5 357 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 NKX2-3Q8TAU0 364 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 APPBP2Q92624 585 aa22.54■■□□□ 1.2
IFT140-208ENST00000566818 ARPP21Q9UBL0 812 aaPredicted RBP22.54■■□□□ 1.2
IFT140-208ENST00000566818 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
IFT140-208ENST00000566818 VCAM1P19320 739 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 GUCY1A2P33402 732 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 MTFR1Q15390 333 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 C12orf60Q5U649 245 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 SLC44A5Q8NCS7 719 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 ACER1Q8TDN7 264 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 DYNLL2Q96FJ2 89 aa22.53■■□□□ 1.2
IFT140-208ENST00000566818 USP17L12C9JPN9 530 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 USP17L21D6R901 530 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 CCL5P13501 91 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 MX1P20591 662 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 CCAR1Q8IX12 1150 aaKnown RBP22.52■■□□□ 1.2
IFT140-208ENST00000566818 GCC1Q96CN9 775 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 CCDC17Q96LX7 622 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 SH2D4AQ9H788 454 aa22.52■■□□□ 1.2
IFT140-208ENST00000566818 ELNP15502 786 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 GNAT2P19087 354 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 MAPK4P31152 587 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 ERVK-9P63128 1117 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 ERVK-24P63145 666 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 HDAC1Q13547 482 aaPredicted RBP22.51■■□□□ 1.19
IFT140-208ENST00000566818 GIMAP6Q6P9H5 292 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 C16orf86Q6ZW13 317 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 STRBPQ96SI9 672 aaKnown RBP22.51■■□□□ 1.19
IFT140-208ENST00000566818 PAGR1Q9BTK6 254 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 RNF208Q9H0X6 261 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 ARHGEF10LQ9HCE6 1279 aa22.51■■□□□ 1.19
IFT140-208ENST00000566818 CYP2D7A0A087X1C5 515 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 INHAP05111 366 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 GJB1P08034 283 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 CDK8P49336 464 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 ICA1Q05084 483 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 CTR9Q6PD62 1173 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 CATSPERGQ6ZRH7 1159 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 SOCS4Q8WXH5 440 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 FSD1Q9BTV5 496 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 RPAP3Q9H6T3 665 aaPredicted RBP22.5■■□□□ 1.19
IFT140-208ENST00000566818 CWC22Q9HCG8 908 aaKnown RBP22.5■■□□□ 1.19
IFT140-208ENST00000566818 TXNRD2Q9NNW7 524 aa22.5■■□□□ 1.19
IFT140-208ENST00000566818 AKR1B1P15121 316 aa22.49■■□□□ 1.19
IFT140-208ENST00000566818 CCNA1P78396 465 aa22.49■■□□□ 1.19
IFT140-208ENST00000566818 ANKRD45Q5TZF3 282 aa22.49■■□□□ 1.19
IFT140-208ENST00000566818 OTUD7AQ8TE49 926 aaPredicted RBP22.49■■□□□ 1.19
IFT140-208ENST00000566818 OSBP2Q969R2 916 aa22.49■■□□□ 1.19
IFT140-208ENST00000566818 RBPJLQ9UBG7 517 aa22.49■■□□□ 1.19
IFT140-208ENST00000566818 RABGAP1Q9Y3P9 1069 aa22.49■■□□□ 1.19
IFT140-208ENST00000566818 BRCA2P51587 3418 aa22.48■■□□□ 1.19
IFT140-208ENST00000566818 GPAA1O43292 621 aa22.48■■□□□ 1.19
IFT140-208ENST00000566818 HMGCRP04035 888 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 GJA8P48165 433 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 SBK1Q52WX2 424 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 LBX2Q6XYB7 198 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 LPAR1Q92633 364 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 NUDT12Q9BQG2 462 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 TANGO6Q9C0B7 1094 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 UNC93B1Q9H1C4 597 aa22.47■■□□□ 1.19
IFT140-208ENST00000566818 A0A1W2PRG0 241 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 GSG1L2A8MUP6 293 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 CAPN2P17655 700 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 TDO2P48775 406 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 SHISA4Q96DD7 197 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 DOCK3Q8IZD9 2030 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 ROBO3Q96MS0 1386 aa22.46■■□□□ 1.19
IFT140-208ENST00000566818 SPDYE16A6NNV3 312 aaPredicted RBP22.45■■□□□ 1.18
IFT140-208ENST00000566818 M0R2C6 588 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 PEX10O60683 326 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 APPP05067 770 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 PLEKHH3Q7Z736 793 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 TRMT44Q8IYL2 757 aaKnown RBP22.45■■□□□ 1.18
IFT140-208ENST00000566818 NACAP1Q9BZK3 213 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 TMX2Q9Y320 296 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 SALL3Q9BXA9 1300 aa22.45■■□□□ 1.18
IFT140-208ENST00000566818 PLXNB2O15031 1838 aa22.44■■□□□ 1.18
IFT140-208ENST00000566818 Q3C1V9 767 aa22.44■■□□□ 1.18
IFT140-208ENST00000566818 GPR142Q7Z601 462 aa22.44■■□□□ 1.18
IFT140-208ENST00000566818 U2AF1L4Q8WU68 220 aaKnown RBP22.44■■□□□ 1.18
IFT140-208ENST00000566818 PORCNQ9H237 461 aa22.44■■□□□ 1.18
IFT140-208ENST00000566818 KANSL2Q9H9L4 492 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 1100 ms