RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CHRDL2Q6WN34 429 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 SIRT2Q8IXJ6 389 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 USP6NLQ92738 828 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 PAWRQ96IZ0 340 aaKnown RBP18.17■□□□□ 0.5
RNF40-209ENST00000566703 FEZ1Q99689 392 aa18.17■□□□□ 0.5
RNF40-209ENST00000566703 MYO5AQ9Y4I1 1855 aaKnown RBP18.17■□□□□ 0.5
RNF40-209ENST00000566703 CDK5RAP2Q96SN8 1893 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 EVI5O60447 810 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 SHMT1P34896 483 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 CCNA1P78396 465 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 GPR142Q7Z601 462 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 PLEKHH3Q7Z736 793 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 TRIB2Q92519 343 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 PRO3102Q9H379 93 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
RNF40-209ENST00000566703 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 GOLIM4O00461 696 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 GLRX3O76003 335 aaKnown RBP18.15■□□□□ 0.5
RNF40-209ENST00000566703 RGS2P41220 211 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 MORN1Q5T089 497 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 PORCNQ9H237 461 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 MCM9Q9NXL9 1143 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 RBM27Q9P2N5 1060 aaKnown RBP18.15■□□□□ 0.5
RNF40-209ENST00000566703 OGDHLQ9ULD0 1010 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 ZNF532Q9HCE3 1301 aa18.15■□□□□ 0.5
RNF40-209ENST00000566703 A0A1W2PPC1 479 aa18.14■□□□□ 0.49
RNF40-209ENST00000566703 PEX10O60683 326 aa18.14■□□□□ 0.49
RNF40-209ENST00000566703 ATP5JP18859 108 aa18.14■□□□□ 0.49
RNF40-209ENST00000566703 TRIM32Q13049 653 aa18.14■□□□□ 0.49
RNF40-209ENST00000566703 ACER1Q8TDN7 264 aa18.14■□□□□ 0.49
RNF40-209ENST00000566703 DNAJC2Q99543 621 aaKnown RBP18.14■□□□□ 0.49
RNF40-209ENST00000566703 NBPF3Q9H094 633 aa18.14■□□□□ 0.49
RNF40-209ENST00000566703 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
RNF40-209ENST00000566703 BRCA2P51587 3418 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 APBB1O00213 710 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
RNF40-209ENST00000566703 VCAM1P19320 739 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 GUCY1A2P33402 732 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 ZYXQ15942 572 aaKnown RBP18.13■□□□□ 0.49
RNF40-209ENST00000566703 ATP8A2Q9NTI2 1148 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 SWAP70Q9UH65 585 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 MYH1P12882 1939 aa18.13■□□□□ 0.49
RNF40-209ENST00000566703 CNMDO75829 334 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 PRKAR2AP13861 404 aaKnown RBP18.12■□□□□ 0.49
RNF40-209ENST00000566703 ADD2P35612 726 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 MAP2K5Q13163 448 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
RNF40-209ENST00000566703 APBA2Q99767 749 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.12■□□□□ 0.495e-7■■□□□ 13.2
RNF40-209ENST00000566703 BOLA2Q9H3K6 86 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
RNF40-209ENST00000566703 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 HOXC10Q9NYD6 342 aa18.12■□□□□ 0.49
RNF40-209ENST00000566703 SLC15A5A6NIM6 579 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 PTPREP23469 700 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 MNX1P50219 401 aaPredicted RBP18.11■□□□□ 0.49
RNF40-209ENST00000566703 CACNB2Q08289 660 aaPredicted RBP18.11■□□□□ 0.49
RNF40-209ENST00000566703 COG2Q14746 738 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 SEPT2Q15019 361 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 TMEM179Q6ZVK1 233 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 DIS3LQ8TF46 1054 aaKnown RBP18.11■□□□□ 0.49
RNF40-209ENST00000566703 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 HAUS7Q99871 368 aa18.11■□□□□ 0.49
RNF40-209ENST00000566703 HOXC6P09630 235 aa18.1■□□□□ 0.49
RNF40-209ENST00000566703 UBE3CQ15386 1083 aa18.1■□□□□ 0.49
RNF40-209ENST00000566703 CCDC17Q96LX7 622 aa18.1■□□□□ 0.49
RNF40-209ENST00000566703 C11orf49Q9H6J7 331 aa18.1■□□□□ 0.49
RNF40-209ENST00000566703 RPAP3Q9H6T3 665 aaPredicted RBP18.1■□□□□ 0.49
RNF40-209ENST00000566703 PLXNB2O15031 1838 aa18.09■□□□□ 0.49
RNF40-209ENST00000566703 A0A1W2PRG0 241 aa18.09■□□□□ 0.49
RNF40-209ENST00000566703 SPDYE16A6NNV3 312 aaPredicted RBP18.09■□□□□ 0.49
RNF40-209ENST00000566703 MPHOSPH10O00566 681 aaKnown RBP18.09■□□□□ 0.49
RNF40-209ENST00000566703 MFSD14CQ5VZR4 134 aa18.09■□□□□ 0.49
RNF40-209ENST00000566703 ARMT1Q9H993 441 aa18.09■□□□□ 0.49
RNF40-209ENST00000566703 BTBD7Q9P203 1132 aa18.09■□□□□ 0.49
RNF40-209ENST00000566703 STRNO43815 780 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 BMP8BP34820 402 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 CCL14Q16627 93 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 C12orf60Q5U649 245 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 LHX8Q68G74 356 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 LPAR1Q92633 364 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 DDRGK1Q96HY6 314 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 IVNS1ABPQ9Y6Y0 642 aa18.08■□□□□ 0.48
RNF40-209ENST00000566703 MBD4O95243 580 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 GRB14Q14449 540 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 AMOTL1Q8IY63 956 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 MB21D1Q8N884 522 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 SHCBP1Q8NEM2 672 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 SH2D4AQ9H788 454 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 ARHGEF10LQ9HCE6 1279 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 TMX2Q9Y320 296 aa18.07■□□□□ 0.48
RNF40-209ENST00000566703 PRKAB2O43741 272 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms