RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 FEZ1Q99689 392 aa15.39■□□□□ 0.05
CNEP1R1-208ENST00000566482 CAP1Q01518 475 aa15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 USP17L2Q6R6M4 530 aa15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 CENPQQ7L2Z9 268 aaPredicted RBP15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 DIAPH3Q9NSV4 1193 aa15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 CCDC171Q6TFL3 1326 aa15.38■□□□□ 0.05
CNEP1R1-208ENST00000566482 NEFLP07196 543 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 RASA1P20936 1047 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 PABPC4Q13310 644 aaKnown RBP eCLIP15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 OTOP1Q7RTM1 612 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 CLEC10AQ8IUN9 316 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 ABHD8Q96I13 439 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 KIAA1683Q9H0B3 1180 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
CNEP1R1-208ENST00000566482 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 HIP1O00291 1037 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 BCRP11274 1271 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 USP14P54578 494 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 ICA1Q05084 483 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 PPARAQ07869 468 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 ALX1Q15699 326 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 CWC27Q6UX04 472 aaKnown RBP15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 SMCR8Q8TEV9 937 aaPredicted RBP15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 C12orf42Q96LP6 360 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 ASCC2Q9H1I8 757 aaPredicted RBP15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 TRIM17Q9Y577 477 aa15.36■□□□□ 0.05
CNEP1R1-208ENST00000566482 HSPD1P10809 573 aaKnown RBP15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 OSBPP22059 807 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 KCNA4P22459 653 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 MFAP1P55081 439 aaKnown RBP15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 LACTBP83111 547 aaPredicted RBP15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 KIF22Q14807 665 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 SIAH1Q8IUQ4 282 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 ARHGAP39Q9C0H5 1083 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 EFCC1Q9HA90 598 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 ZSWIM8A7E2V4 1837 aa15.35■□□□□ 0.05
CNEP1R1-208ENST00000566482 PRDM1O75626 825 aa15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 FGAP02671 866 aa15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 SLC3A2P08195 630 aaKnown RBP15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 CTDSPL2Q05D32 466 aa15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 ZNF287Q9HBT7 754 aa15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 ARHGEF10LQ9HCE6 1279 aa15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 GREB1LQ9C091 1923 aaPredicted RBP15.34■□□□□ 0.05
CNEP1R1-208ENST00000566482 CAPN15O75808 1086 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 VCAM1P19320 739 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 CTGFP29279 349 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 ATP2B2Q01814 1243 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 PDE4BQ07343 736 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 ARHGEF6Q15052 776 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 SKAP1Q86WV1 359 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 ZNF444Q8N0Y2 327 aaPredicted RBP15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 ANKRD13CQ8N6S4 541 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 ANAPC4Q9UJX5 808 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 ZMYM6O95789 1325 aa15.33■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L15C9J2P7 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L13C9JLJ4 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L11C9JVI0 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L18D6R9N7 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L22D6RA61 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L17D6RBQ6 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L19D6RCP7 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L20D6RJB6 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 PSMC4P43686 418 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 GCLCP48506 637 aaPredicted RBP15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 HERVK_113P62684 666 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 USP17L24Q0WX57 530 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 KIAA1755Q5JYT7 1200 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 RPAP3Q9H6T3 665 aaPredicted RBP15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 TMX2Q9Y320 296 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
CNEP1R1-208ENST00000566482 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 CHMLP26374 656 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 FAM110CQ1W6H9 321 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 IL25Q9H293 177 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 VCPKMTQ9H867 229 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 INCENPQ9NQS7 918 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 PTPN22Q9Y2R2 807 aa15.31■□□□□ 0.04
CNEP1R1-208ENST00000566482 PLIN4Q96Q06 1357 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms