RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
EDC3-210ENST00000566219 METTL16Q86W50 562 aaKnown RBP19.3■□□□□ 0.68
EDC3-210ENST00000566219 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
EDC3-210ENST00000566219 FEZ1Q99689 392 aa19.3■□□□□ 0.68
EDC3-210ENST00000566219 GINM1Q9NU53 330 aa19.3■□□□□ 0.68
EDC3-210ENST00000566219 PRKAG2Q9UGJ0 569 aa19.3■□□□□ 0.68
EDC3-210ENST00000566219 RABGAP1Q9Y3P9 1069 aa19.3■□□□□ 0.68
EDC3-210ENST00000566219 GH2P01242 217 aa19.29■□□□□ 0.68
EDC3-210ENST00000566219 HLA-DOAP06340 250 aa19.29■□□□□ 0.68
EDC3-210ENST00000566219 GNAI3P08754 354 aa19.29■□□□□ 0.68
EDC3-210ENST00000566219 CCNA1P78396 465 aa19.29■□□□□ 0.68
EDC3-210ENST00000566219 FOXP4Q8IVH2 680 aaPredicted RBP19.29■□□□□ 0.68
EDC3-210ENST00000566219 ATP11BQ9Y2G3 1177 aa19.29■□□□□ 0.68
EDC3-210ENST00000566219 SPTBN5Q9NRC6 3674 aaKnown RBP19.28■□□□□ 0.68
EDC3-210ENST00000566219 DNM1LO00429 736 aa19.28■□□□□ 0.68
EDC3-210ENST00000566219 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
EDC3-210ENST00000566219 PPP4CP60510 307 aa19.28■□□□□ 0.68
EDC3-210ENST00000566219 LPAR1Q92633 364 aa19.28■□□□□ 0.68
EDC3-210ENST00000566219 CDX2Q99626 313 aaPredicted RBP19.28■□□□□ 0.68
EDC3-210ENST00000566219 SLC15A5A6NIM6 579 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L15C9J2P7 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L11C9JVI0 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L18D6R9N7 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L22D6RA61 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L19D6RCP7 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L20D6RJB6 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 MSCO60682 206 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 PTPREP23469 700 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 CYP2C19P33261 490 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 ATP2B2Q01814 1243 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 USP17L24Q0WX57 530 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 TTC39AQ5SRH9 613 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 MAFAQ8NHW3 353 aaPredicted RBP19.27■□□□□ 0.68
EDC3-210ENST00000566219 NPLOC4Q8TAT6 608 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 C12orf42Q96LP6 360 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 PRDM5Q9NQX1 630 aaPredicted RBP19.27■□□□□ 0.68
EDC3-210ENST00000566219 IVNS1ABPQ9Y6Y0 642 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 ZNF236Q9UL36 1845 aa19.27■□□□□ 0.68
EDC3-210ENST00000566219 CDH23Q9H251 3354 aa19.26■□□□□ 0.67
EDC3-210ENST00000566219 DYNLL1P63167 89 aaKnown RBP19.26■□□□□ 0.67
EDC3-210ENST00000566219 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.67
EDC3-210ENST00000566219 GRB14Q14449 540 aa19.26■□□□□ 0.67
EDC3-210ENST00000566219 SHHQ15465 462 aa19.26■□□□□ 0.67
EDC3-210ENST00000566219 C9orf50Q5SZB4 431 aa19.26■□□□□ 0.67
EDC3-210ENST00000566219 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
EDC3-210ENST00000566219 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
EDC3-210ENST00000566219 PNMA6EA0A0J9YXQ4 647 aa19.25■□□□□ 0.67
EDC3-210ENST00000566219 VCAM1P19320 739 aa19.25■□□□□ 0.67
EDC3-210ENST00000566219 GJC2Q5T442 439 aaPredicted RBP19.25■□□□□ 0.67
EDC3-210ENST00000566219 BTBD7Q9P203 1132 aa19.25■□□□□ 0.67
EDC3-210ENST00000566219 CYP2E1P05181 493 aaPredicted RBP19.24■□□□□ 0.67
EDC3-210ENST00000566219 HOXC6P09630 235 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 CYBAP13498 195 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 RAB3GAP1Q15042 981 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 ANO1Q5XXA6 986 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 CATSPERGQ6ZRH7 1159 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 MYLIPQ8WY64 445 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 DBNDD2Q9BQY9 259 aa19.24■□□□□ 0.67
EDC3-210ENST00000566219 A0A0G2JMZ2 1700 aa19.23■□□□□ 0.67
EDC3-210ENST00000566219 NAV1Q8NEY1 1877 aa19.23■□□□□ 0.67
EDC3-210ENST00000566219 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
EDC3-210ENST00000566219 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
EDC3-210ENST00000566219 USP14P54578 494 aa19.23■□□□□ 0.67
EDC3-210ENST00000566219 ACER1Q8TDN7 264 aa19.23■□□□□ 0.67
EDC3-210ENST00000566219 CLUAP1Q96AJ1 413 aa19.23■□□□□ 0.67
EDC3-210ENST00000566219 SEMA6BQ9H3T3 888 aa19.23■□□□□ 0.67
EDC3-210ENST00000566219 PIH1D3Q9NQM4 214 aaKnown RBP19.23■□□□□ 0.67
EDC3-210ENST00000566219 KBTBD13C9JR72 458 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 GNAI2P04899 355 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 ZAP70P43403 619 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 TRIM60Q495X7 471 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 MIGA1Q8NAN2 632 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 BADQ92934 168 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 KIAA1683Q9H0B3 1180 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 RPAP3Q9H6T3 665 aaPredicted RBP19.22■□□□□ 0.67
EDC3-210ENST00000566219 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
EDC3-210ENST00000566219 RLBP1P12271 317 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 CYP7A1P22680 504 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 USP5P45974 858 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 SLC39A5Q6ZMH5 540 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
EDC3-210ENST00000566219 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 TTYH1Q9H313 450 aaPredicted RBP19.21■□□□□ 0.67
EDC3-210ENST00000566219 PDLIM7Q9NR12 457 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 SERPINB13Q9UIV8 391 aa19.21■□□□□ 0.67
EDC3-210ENST00000566219 ADORA2AP29274 412 aa19.2■□□□□ 0.66
EDC3-210ENST00000566219 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
EDC3-210ENST00000566219 DPP9Q86TI2 863 aa19.2■□□□□ 0.66
EDC3-210ENST00000566219 ARRDC4Q8NCT1 418 aa19.2■□□□□ 0.66
EDC3-210ENST00000566219 IGHA2P01877 340 aa19.19■□□□□ 0.66
EDC3-210ENST00000566219 MS4A1P11836 297 aa19.19■□□□□ 0.66
EDC3-210ENST00000566219 FOSL2P15408 326 aa19.19■□□□□ 0.66
EDC3-210ENST00000566219 SMAD3P84022 425 aaKnown RBP19.19■□□□□ 0.66
EDC3-210ENST00000566219 OS9Q13438 667 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms