RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 USP17L24Q0WX57 530 aa15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 MTFR1Q15390 333 aa15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 ZYXQ15942 572 aaKnown RBP15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 LCORLQ8N3X6 602 aa15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 ARMT1Q9H993 441 aa15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 ECHDC1Q9NTX5 307 aa15.56■□□□□ 0.08
TNRC6A-211ENST00000566108 CEP290O15078 2479 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 DOCK3Q8IZD9 2030 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 DDX60LQ5H9U9 1706 aaKnown RBP15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 INHAP05111 366 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 ELNP15502 786 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 MAPK4P31152 587 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 GJA8P48165 433 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 PLCD1P51178 756 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 UBE3CQ15386 1083 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 SDR42E1Q8WUS8 393 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 SOCS4Q8WXH5 440 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 C12orf42Q96LP6 360 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 PAGR1Q9BTK6 254 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 KIAA1683Q9H0B3 1180 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 SH2D4AQ9H788 454 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 DCP1AQ9NPI6 582 aaPredicted RBP15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 CENPFP49454 3210 aa15.55■□□□□ 0.08
TNRC6A-211ENST00000566108 TCRBV5S4A2TA0A5A2 114 aa15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 HMGCRP04035 888 aa15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 SHMT1P34896 483 aa15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 TRMT44Q8IYL2 757 aaKnown RBP15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 EDC3Q96F86 508 aaKnown RBP15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 NUDT12Q9BQG2 462 aa15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 EMILIN3Q9NT22 766 aa15.54■□□□□ 0.08
TNRC6A-211ENST00000566108 ERC2O15083 957 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 SMARCA5O60264 1052 aaPredicted RBP15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 TFRCP02786 760 aaKnown RBP15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 ERVK-9P63128 1117 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 ERVK-24P63145 666 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 JAG1P78504 1218 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 SHROOM1Q2M3G4 852 aaPredicted RBP15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 TMEM179Q6ZVK1 233 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 U2AF1L4Q8WU68 220 aaKnown RBP15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 UNC93B1Q9H1C4 597 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 DCTPP1Q9H773 170 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 SLC4A4Q9Y6R1 1079 aa15.53■□□□□ 0.08
TNRC6A-211ENST00000566108 FARP2O94887 1054 aaPredicted RBP15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 ZFYP08048 801 aaPredicted RBP15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 VCAM1P19320 739 aa15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 SEPT2Q15019 361 aa15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 WDR78Q5VTH9 848 aa15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 DPF3Q92784 378 aa15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 CCDC17Q96LX7 622 aa15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 RABGAP1Q9Y3P9 1069 aa15.52■□□□□ 0.08
TNRC6A-211ENST00000566108 BAZ2AQ9UIF9 1905 aaKnown RBP15.52■□□□□ 0.07
TNRC6A-211ENST00000566108 SGPL1O95470 568 aa15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 RGS2P41220 211 aa15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 GABPAQ06546 454 aa15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 DEFB118Q96PH6 123 aa15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 TANGO6Q9C0B7 1094 aa15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 HMX1Q9NP08 348 aaPredicted RBP15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 ARPP21Q9UBL0 812 aaPredicted RBP15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 IVNS1ABPQ9Y6Y0 642 aa15.51■□□□□ 0.07
TNRC6A-211ENST00000566108 SLC34A2O95436 690 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 ZKSCAN1P17029 563 aaPredicted RBP15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 RRP1P56182 461 aaKnown RBP15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 ICA1Q05084 483 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 CATSPERGQ6ZRH7 1159 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 PLEKHH3Q7Z736 793 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 KBTBD3Q8NAB2 608 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.5■□□□□ 0.071e-37■■■■□ 21.6
TNRC6A-211ENST00000566108 RPAP3Q9H6T3 665 aaPredicted RBP15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 ZNF287Q9HBT7 754 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 RBPJLQ9UBG7 517 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 NR2E3Q9Y5X4 410 aa15.5■□□□□ 0.07
TNRC6A-211ENST00000566108 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 USP17L12C9JPN9 530 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 USP17L21D6R901 530 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 PRKAB2O43741 272 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 CYP2D6P10635 497 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 XRCC5P13010 732 aaKnown RBP15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 GNAT2P19087 354 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 CYP2B6P20813 491 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 ACER1Q8TDN7 264 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 LPAR1Q92633 364 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 TXNRD2Q9NNW7 524 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 HOXC10Q9NYD6 342 aa15.49■□□□□ 0.07
TNRC6A-211ENST00000566108 RPTORQ8N122 1335 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 RNF113AO15541 343 aaKnown RBP15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 ATP2B2Q01814 1243 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 COG2Q14746 738 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 C12orf60Q5U649 245 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 GPR142Q7Z601 462 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 APPBP2Q92624 585 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 DYNLL2Q96FJ2 89 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 APBA2Q99767 749 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 PAK6Q9NQU5 681 aaPredicted RBP15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 GJD2Q9UKL4 321 aa15.48■□□□□ 0.07
TNRC6A-211ENST00000566108 APPP05067 770 aa15.47■□□□□ 0.07
TNRC6A-211ENST00000566108 TDO2P48775 406 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms