RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 SLC4A7Q9Y6M7 1214 aa11.52□□□□□ -0.57
SMPD3-206ENST00000566009 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 PLXNA3P51805 1871 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 PRR23AA6NEV1 266 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
SMPD3-206ENST00000566009 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
SMPD3-206ENST00000566009 TMEM67Q5HYA8 995 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 PRAMEF19Q5SWL8 479 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 WDR78Q5VTH9 848 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 PBXIP1Q96AQ6 731 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
SMPD3-206ENST00000566009 USP40Q9NVE5 1235 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 ATRXP46100 2492 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 TRANK1O15050 2925 aa11.51□□□□□ -0.57
SMPD3-206ENST00000566009 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 LPXNO60711 386 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
SMPD3-206ENST00000566009 RIPK4P57078 832 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 IFIT5Q13325 482 aaKnown RBP11.5□□□□□ -0.57
SMPD3-206ENST00000566009 GRB14Q14449 540 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 DGLUCYQ7Z3D6 616 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 RNF180Q86T96 592 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
SMPD3-206ENST00000566009 SUGP1Q8IWZ8 645 aaKnown RBP11.5□□□□□ -0.57
SMPD3-206ENST00000566009 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 STARD7Q9NQZ5 370 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 ZNF536O15090 1300 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 RIF1Q5UIP0 2472 aaKnown RBP11.5□□□□□ -0.57
SMPD3-206ENST00000566009 TECTAO75443 2155 aa11.5□□□□□ -0.57
SMPD3-206ENST00000566009 TPRP12270 2363 aaKnown RBP11.49□□□□□ -0.57
SMPD3-206ENST00000566009 DDTLA6NHG4 134 aaPredicted RBP11.49□□□□□ -0.57
SMPD3-206ENST00000566009 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 H0Y858 1186 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 ENTPD3O75355 529 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 PGK1P00558 417 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 ATP2A2P16615 1042 aaKnown RBP11.49□□□□□ -0.57
SMPD3-206ENST00000566009 RGS3P49796 1198 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 ZP2Q05996 745 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 ACAP1Q15027 740 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 PUS10Q3MIT2 529 aaKnown RBP11.49□□□□□ -0.57
SMPD3-206ENST00000566009 VPS37DQ86XT2 251 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 GTF3C2Q8WUA4 911 aaPredicted RBP11.49□□□□□ -0.57
SMPD3-206ENST00000566009 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 MUTYHQ9UIF7 546 aa11.49□□□□□ -0.57
SMPD3-206ENST00000566009 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
SMPD3-206ENST00000566009 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 CYP2C18P33260 490 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 IRS1P35568 1242 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 CCNA1P78396 465 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 TAP1Q03518 808 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 GCKRQ14397 625 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 HERC4Q5GLZ8 1057 aaPredicted RBP11.48□□□□□ -0.57
SMPD3-206ENST00000566009 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 EDAQ92838 391 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 FSD1Q9BTV5 496 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 IVNS1ABPQ9Y6Y0 642 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 MAPK8IP3Q9UPT6 1336 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 DOCK2Q92608 1830 aa11.48□□□□□ -0.57
SMPD3-206ENST00000566009 CACNA1HO95180 2353 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 TMEM221A6NGB7 291 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 M0R296 226 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 CNMDO75829 334 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 ARHGEF15O94989 841 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 RARBP10826 455 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 CDK7P50613 346 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 CASP7P55210 303 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 MTMR2Q13614 643 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 ST3GAL2Q16842 350 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 FBXL6Q8N531 539 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 NUP133Q8WUM0 1156 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
SMPD3-206ENST00000566009 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 OSBPL5Q9H0X9 879 aaPredicted RBP11.47□□□□□ -0.57
SMPD3-206ENST00000566009 PRKAG3Q9UGI9 489 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 RALYQ9UKM9 306 aaKnown RBP11.47□□□□□ -0.57
SMPD3-206ENST00000566009 RABGAP1Q9Y3P9 1069 aa11.47□□□□□ -0.57
SMPD3-206ENST00000566009 CFAP47Q6ZTR5 3102 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 MROH7Q68CQ1 1323 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 PI4KAP2A4QPH2 592 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 TBC1D12O60347 775 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 ACLYP53396 1101 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 BACE1P56817 501 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 KSR2Q6VAB6 950 aa11.46□□□□□ -0.57
SMPD3-206ENST00000566009 TRIM67Q6ZTA4 783 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms