RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 VPS54Q9P1Q0 977 aa25.59■■□□□ 1.69
SPNS1-207ENST00000565975 CTIFO43310 598 aaKnown RBP25.58■■□□□ 1.69
SPNS1-207ENST00000565975 PRDM1O75626 825 aa25.58■■□□□ 1.69
SPNS1-207ENST00000565975 PLEKHA8P1O95397 391 aa25.58■■□□□ 1.69
SPNS1-207ENST00000565975 LMOD1P29536 600 aaPredicted RBP25.58■■□□□ 1.69
SPNS1-207ENST00000565975 GRIN1Q05586 938 aa25.58■■□□□ 1.69
SPNS1-207ENST00000565975 TRIML1Q8N9V2 468 aa25.58■■□□□ 1.69
SPNS1-207ENST00000565975 V9GY48 417 aaPredicted RBP25.58■■□□□ 1.69
SPNS1-207ENST00000565975 EP400Q96L91 3159 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 POLR2DO15514 142 aaKnown RBP25.57■■□□□ 1.68
SPNS1-207ENST00000565975 PRDX5P30044 214 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 SARSP49591 514 aaKnown RBP25.57■■□□□ 1.68
SPNS1-207ENST00000565975 SPECC1Q5M775 1068 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 NYAP1Q6ZVC0 841 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 ARHGEF1Q92888 912 aaKnown RBP25.57■■□□□ 1.68
SPNS1-207ENST00000565975 DACH1Q9UI36 760 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 CNTNAP5Q8WYK1 1306 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 CCDC88AQ3V6T2 1871 aa25.57■■□□□ 1.68
SPNS1-207ENST00000565975 PDE4BQ07343 736 aa25.56■■□□□ 1.68
SPNS1-207ENST00000565975 CCAR2Q8N163 923 aaKnown RBP25.56■■□□□ 1.68
SPNS1-207ENST00000565975 CTCFLQ8NI51 663 aaPredicted RBP25.56■■□□□ 1.68
SPNS1-207ENST00000565975 SERTAD1Q9UHV2 236 aa25.56■■□□□ 1.68
SPNS1-207ENST00000565975 MAN1B1Q9UKM7 699 aa25.56■■□□□ 1.68
SPNS1-207ENST00000565975 NRDCO43847 1150 aa25.56■■□□□ 1.68
SPNS1-207ENST00000565975 MLKLQ8NB16 471 aa25.56■■□□□ 1.68
SPNS1-207ENST00000565975 LEMD3Q9Y2U8 911 aa25.56■■□□□ 1.68
SPNS1-207ENST00000565975 ACTN4O43707 911 aaKnown RBP25.55■■□□□ 1.68
SPNS1-207ENST00000565975 SFPQP23246 707 aaKnown RBP eCLIP25.55■■□□□ 1.68
SPNS1-207ENST00000565975 CEP135Q66GS9 1140 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 ARMCX5Q6P1M9 558 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 TNFRSF25Q93038 417 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 SMARCE1Q969G3 411 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 FERMT2Q96AC1 680 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 CCDC34Q96HJ3 373 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 CSRNP2Q9H175 543 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 LY75O60449 1722 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 ATP1A3P13637 1013 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 SYCP1Q15431 976 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 ZNF710Q8N1W2 664 aa25.55■■□□□ 1.68
SPNS1-207ENST00000565975 TNRC6CQ9HCJ0 1690 aaKnown RBP25.54■■□□□ 1.68
SPNS1-207ENST00000565975 KIF2AO00139 706 aaPredicted RBP25.54■■□□□ 1.68
SPNS1-207ENST00000565975 FOXN1O15353 648 aa25.54■■□□□ 1.68
SPNS1-207ENST00000565975 BMP6P22004 513 aa25.54■■□□□ 1.68
SPNS1-207ENST00000565975 UBASH3AP57075 661 aa25.54■■□□□ 1.68
SPNS1-207ENST00000565975 MORC3Q14149 939 aa25.54■■□□□ 1.68
SPNS1-207ENST00000565975 PTPN14Q15678 1187 aa25.54■■□□□ 1.68
SPNS1-207ENST00000565975 DZIP1Q86YF9 867 aaKnown RBP25.54■■□□□ 1.68
SPNS1-207ENST00000565975 WDR66Q8TBY9 1149 aa25.54■■□□□ 1.68
SPNS1-207ENST00000565975 SPATA20Q8TB22 786 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 TAF1LQ8IZX4 1826 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 PSDA5PKW4 1024 aaPredicted RBP25.53■■□□□ 1.68
SPNS1-207ENST00000565975 USP27XA6NNY8 438 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 SERPINC1P01008 464 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 ATP2B1P20020 1258 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 GRAPQ13588 217 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 NPY5RQ15761 445 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 CT47A1Q5JQC4 288 aaPredicted RBP25.53■■□□□ 1.68
SPNS1-207ENST00000565975 TXNRD3Q86VQ6 643 aa25.53■■□□□ 1.68
SPNS1-207ENST00000565975 SRBD1Q8N5C6 995 aaKnown RBP25.53■■□□□ 1.68
SPNS1-207ENST00000565975 GRAPLQ8TC17 118 aaPredicted RBP25.53■■□□□ 1.68
SPNS1-207ENST00000565975 TSC1Q92574 1164 aa25.52■■□□□ 1.68
SPNS1-207ENST00000565975 FAM205CA6NFA0 338 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 ONECUT3O60422 494 aaPredicted RBP25.51■■□□□ 1.67
SPNS1-207ENST00000565975 PRR29P0C7W0 189 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 CYP2D6P10635 497 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 EARS2Q5JPH6 523 aaKnown RBP25.51■■□□□ 1.67
SPNS1-207ENST00000565975 C15orf52Q6ZUT6 534 aaKnown RBP25.51■■□□□ 1.67
SPNS1-207ENST00000565975 CCDC24Q8N4L8 307 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 ENOX1Q8TC92 643 aaKnown RBP25.51■■□□□ 1.67
SPNS1-207ENST00000565975 ROBO3Q96MS0 1386 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 TSPY2A6NKD2 308 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 KIF5BP33176 963 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 TRAPPC10P48553 1259 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 GSTO1P78417 241 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 FAM47AQ5JRC9 791 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 AMIGO3Q86WK7 504 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 VSTM4Q8IW00 320 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 CCDC112Q8NEF3 446 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 ANKS1AQ92625 1134 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 FANCLQ9NW38 375 aa25.51■■□□□ 1.67
SPNS1-207ENST00000565975 MKRN1Q9UHC7 482 aaKnown RBP25.51■■□□□ 1.67
SPNS1-207ENST00000565975 hCG_1642624A0A1W2PR95 340 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 SCG2P13521 617 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 RFC4P35249 363 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 EVX2Q03828 476 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 GLIPR1L2Q4G1C9 344 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 CCDC178Q5BJE1 867 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 MCM9Q9NXL9 1143 aa25.5■■□□□ 1.67
SPNS1-207ENST00000565975 LDHBP07195 334 aaKnown RBP25.49■■□□□ 1.67
SPNS1-207ENST00000565975 PFKFB3Q16875 520 aaPredicted RBP25.49■■□□□ 1.67
SPNS1-207ENST00000565975 TTC38Q5R3I4 469 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 TRAPPC3LQ5T215 181 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 C12orf60Q5U649 245 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 RCSD1Q6JBY9 416 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 DGKHQ86XP1 1220 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 DPF2Q92785 391 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 XDHP47989 1333 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 NPHP1O15259 732 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 NMT2O60551 498 aa25.49■■□□□ 1.67
SPNS1-207ENST00000565975 CFAP100Q494V2 611 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms