RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CPA4Q9UI42 421 aa16.52■□□□□ 0.24
HERPUD1-210ENST00000565966 ADGRA2Q96PE1 1338 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 FOXP2O15409 715 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 KIF22Q14807 665 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 SEPT2Q15019 361 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 TMEM179Q6ZVK1 233 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 TRIM17Q9Y577 477 aa16.51■□□□□ 0.23
HERPUD1-210ENST00000565966 HIP1O00291 1037 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 AKR1B1P15121 316 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 OSBPP22059 807 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 USP14P54578 494 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 FEZ1Q99689 392 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 NAPBQ9H115 298 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
HERPUD1-210ENST00000565966 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 BCRP11274 1271 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 C12orf42Q96LP6 360 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 MKNK2Q9HBH9 465 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
HERPUD1-210ENST00000565966 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
HERPUD1-210ENST00000565966 CAP1Q01518 475 aa16.48■□□□□ 0.23
HERPUD1-210ENST00000565966 CWC27Q6UX04 472 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-210ENST00000565966 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
HERPUD1-210ENST00000565966 ASCC2Q9H1I8 757 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-210ENST00000565966 CAPN15O75808 1086 aa16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 GNRH1P01148 92 aa16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 GCLCP48506 637 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
HERPUD1-210ENST00000565966 A0A1W2PRG0 241 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 HSPD1P10809 573 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 RASA1P20936 1047 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 CHMLP26374 656 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 PSMC4P43686 418 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 ICA1Q05084 483 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 PDE4BQ07343 736 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 PPARAQ07869 468 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 ALX1Q15699 326 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 IL25Q9H293 177 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 KANSL2Q9H9L4 492 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
HERPUD1-210ENST00000565966 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 FAM110CQ1W6H9 321 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 ANKRD13CQ8N6S4 541 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 P2RX7Q99572 595 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
HERPUD1-210ENST00000565966 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 FGAP02671 866 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 VCAM1P19320 739 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 HOXD10P28358 340 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 CTGFP29279 349 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 PRMT2P55345 433 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 FCGRTP55899 365 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-210ENST00000565966 PRDM1O75626 825 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 EEF2P13639 858 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 HERVK_113P62684 666 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 RLFQ13129 1914 aa16.43■□□□□ 0.22
HERPUD1-210ENST00000565966 ZMYM6O95789 1325 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms