RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.14□□□□□ -0.95
CDH1-208ENST00000565810 FZD1Q9UP38 647 aa9.14□□□□□ -0.95
CDH1-208ENST00000565810 PLIN4Q96Q06 1357 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 IGKV6D-41A0A0C4DH26 115 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 UBE2Q2LH0YL09 131 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 SH2B2O14492 632 aaPredicted RBP9.13□□□□□ -0.95
CDH1-208ENST00000565810 TOP1P11387 765 aaKnown RBP9.13□□□□□ -0.95
CDH1-208ENST00000565810 ANTXR2P58335 489 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 FMR1Q06787 632 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDH1-208ENST00000565810 VGLL4Q14135 290 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.13□□□□□ -0.95
CDH1-208ENST00000565810 MOB2Q70IA6 237 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 CATIPQ7Z7H3 387 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 ERO1BQ86YB8 467 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 FBXL16Q8N461 479 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 ENAHQ8N8S7 591 aaPredicted RBP9.13□□□□□ -0.95
CDH1-208ENST00000565810 IGDCC4Q8TDY8 1250 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 ANKS1AQ92625 1134 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDH1-208ENST00000565810 IL17RBQ9NRM6 502 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 NYAP2Q9P242 653 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 CLIP2Q9UDT6 1046 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 NAP1L2Q9ULW6 460 aaPredicted RBP9.13□□□□□ -0.95
CDH1-208ENST00000565810 SLC12A7Q9Y666 1083 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 ZHX2Q9Y6X8 837 aa9.13□□□□□ -0.95
CDH1-208ENST00000565810 PASKQ96RG2 1323 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 TMEM88BA6NKF7 163 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 NMT2O60551 498 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 EEF2P13639 858 aaKnown RBP9.12□□□□□ -0.95
CDH1-208ENST00000565810 PTPRAP18433 802 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 GUCY1A2P33402 732 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 USP14P54578 494 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 AK2P54819 239 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 HUNKP57058 714 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 PPATQ06203 517 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 LDLRAD1Q5T700 205 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 CST9Q5W186 159 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 SGMS1Q86VZ5 419 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 ZNF280CQ8ND82 737 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 BRF1Q92994 677 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 MKL1Q969V6 931 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 CHMP4CQ96CF2 233 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 FEZ1Q99689 392 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 LY9Q9HBG7 655 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 SYNPO2Q9UMS6 1093 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 SSC5DA1L4H1 1573 aa9.12□□□□□ -0.95
CDH1-208ENST00000565810 NAV1Q8NEY1 1877 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 KLF18A0A0U1RQI7 1052 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 USP17L10C9JJH3 530 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 ZBTB43O43298 467 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 RAD21O60216 631 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 CALM1P0DP23 149 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 CALM2P0DP24 149 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 CALM3P0DP25 149 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 ANP32AP39687 249 aaKnown RBP9.11□□□□□ -0.95
CDH1-208ENST00000565810 NOVP48745 357 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 JAG1P78504 1218 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 SPP2Q13103 211 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 BECN1Q14457 450 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 SEC23AQ15436 765 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 SHROOM1Q2M3G4 852 aaPredicted RBP9.11□□□□□ -0.95
CDH1-208ENST00000565810 NOL8Q76FK4 1167 aaKnown RBP9.11□□□□□ -0.95
CDH1-208ENST00000565810 HSCBQ8IWL3 235 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 PNMA1Q8ND90 353 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 NUP133Q8WUM0 1156 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 ZSCAN31Q96LW9 406 aaPredicted RBP9.11□□□□□ -0.95
CDH1-208ENST00000565810 TMEM47Q9BQJ4 181 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 WDR18Q9BV38 432 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 AGXT2Q9BYV1 514 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 GOPCQ9HD26 462 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
CDH1-208ENST00000565810 LIMCH1Q9UPQ0 1083 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 SNCAIPQ9Y6H5 919 aa9.11□□□□□ -0.95
CDH1-208ENST00000565810 SPDYE5A6NIY4 337 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 C19orf81C9J6K1 198 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 CXCL11O14625 94 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 DDAH1O94760 285 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 ZNF157P51786 506 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 BACE1P56817 501 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 PPIL2Q13356 520 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 COL9A3Q14050 684 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 TOB2Q14106 344 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 PPP2R5BQ15173 497 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 SLFN13Q68D06 897 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 RCSD1Q6JBY9 416 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 USP17L2Q6R6M4 530 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 SAPCD2Q86UD0 394 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 CCDC84Q86UT8 332 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 CLEC10AQ8IUN9 316 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 ZNF654Q8IZM8 581 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 LRRC47Q8N1G4 583 aaKnown RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 CTCFLQ8NI51 663 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 ACER1Q8TDN7 264 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 SNX21Q969T3 373 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 OPTNQ96CV9 577 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms