RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 POLR3DP05423 398 aaPredicted RBP28.76■■■□□ 2.19
RAB40C-209ENST00000565511 HABP4Q5JVS0 413 aaKnown RBP28.76■■■□□ 2.19
RAB40C-209ENST00000565511 PORCNQ9H237 461 aa28.76■■■□□ 2.19
RAB40C-209ENST00000565511 PAK6Q9NQU5 681 aaPredicted RBP28.76■■■□□ 2.19
RAB40C-209ENST00000565511 CNMDO75829 334 aa28.75■■■□□ 2.19
RAB40C-209ENST00000565511 MBD4O95243 580 aa28.75■■■□□ 2.19
RAB40C-209ENST00000565511 SGPL1O95470 568 aa28.75■■■□□ 2.19
RAB40C-209ENST00000565511 DEFB118Q96PH6 123 aa28.75■■■□□ 2.19
RAB40C-209ENST00000565511 FEZ1Q99689 392 aa28.75■■■□□ 2.19
RAB40C-209ENST00000565511 PAGR1Q9BTK6 254 aa28.75■■■□□ 2.19
RAB40C-209ENST00000565511 SEPT2Q15019 361 aa28.74■■■□□ 2.19
RAB40C-209ENST00000565511 DYNLL2Q96FJ2 89 aa28.74■■■□□ 2.19
RAB40C-209ENST00000565511 TRIOBPQ9H2D6 2365 aa28.74■■■□□ 2.19
RAB40C-209ENST00000565511 RLFQ13129 1914 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 FARP2O94887 1054 aaPredicted RBP28.73■■■□□ 2.19
RAB40C-209ENST00000565511 VCAM1P19320 739 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 ERVK-9P63128 1117 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 ERVK-24P63145 666 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 GPRC5AQ8NFJ5 357 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 TRIB2Q92519 343 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 LRRCC1Q9C099 1032 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 KIAA1683Q9H0B3 1180 aa28.73■■■□□ 2.19
RAB40C-209ENST00000565511 CHMP4BQ9H444 224 aaKnown RBP28.73■■■□□ 2.19
RAB40C-209ENST00000565511 CYP2D7A0A087X1C5 515 aa28.72■■■□□ 2.19
RAB40C-209ENST00000565511 GCC1Q96CN9 775 aa28.72■■■□□ 2.19
RAB40C-209ENST00000565511 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.72■■■□□ 2.192e-10■■■■□ 22.8
RAB40C-209ENST00000565511 A0A1W2PRG0 241 aa28.71■■■□□ 2.19
RAB40C-209ENST00000565511 HMGCRP04035 888 aa28.71■■■□□ 2.19
RAB40C-209ENST00000565511 CYP2B6P20813 491 aa28.71■■■□□ 2.19
RAB40C-209ENST00000565511 CLEC10AQ8IUN9 316 aa28.71■■■□□ 2.19
RAB40C-209ENST00000565511 CRISPLD2Q9H0B8 497 aa28.71■■■□□ 2.19
RAB40C-209ENST00000565511 COLQQ9Y215 455 aaPredicted RBP28.71■■■□□ 2.19
RAB40C-209ENST00000565511 CATSPERGQ6ZRH7 1159 aa28.7■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L15C9J2P7 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L13C9JLJ4 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L11C9JVI0 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L18D6R9N7 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L22D6RA61 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L17D6RBQ6 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L19D6RCP7 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L20D6RJB6 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L24Q0WX57 530 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 KIAA1755Q5JYT7 1200 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 TSHZ3Q63HK5 1081 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 DIS3LQ8TF46 1054 aaKnown RBP28.69■■■□□ 2.18
RAB40C-209ENST00000565511 USP6NLQ92738 828 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 CABP5Q9NP86 173 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 A0A0G2JMZ2 1700 aa28.69■■■□□ 2.18
RAB40C-209ENST00000565511 GPR142Q7Z601 462 aa28.68■■■□□ 2.18
RAB40C-209ENST00000565511 DPF3Q92784 378 aa28.68■■■□□ 2.18
RAB40C-209ENST00000565511 PARP14Q460N5 1801 aa28.67■■■□□ 2.18
RAB40C-209ENST00000565511 MPHOSPH10O00566 681 aaKnown RBP28.67■■■□□ 2.18
RAB40C-209ENST00000565511 TFRCP02786 760 aaKnown RBP28.67■■■□□ 2.18
RAB40C-209ENST00000565511 AKR1B1P15121 316 aa28.67■■■□□ 2.18
RAB40C-209ENST00000565511 USP14P54578 494 aa28.67■■■□□ 2.18
RAB40C-209ENST00000565511 CCL14Q16627 93 aa28.67■■■□□ 2.18
RAB40C-209ENST00000565511 MORN1Q5T089 497 aa28.67■■■□□ 2.18
RAB40C-209ENST00000565511 PUS7LQ9H0K6 701 aaKnown RBP28.67■■■□□ 2.18
RAB40C-209ENST00000565511 RPAP3Q9H6T3 665 aaPredicted RBP28.67■■■□□ 2.18
RAB40C-209ENST00000565511 BTBD7Q9P203 1132 aa28.67■■■□□ 2.18
RAB40C-209ENST00000565511 SPDYE16A6NNV3 312 aaPredicted RBP28.66■■■□□ 2.18
RAB40C-209ENST00000565511 MAPK4P31152 587 aa28.66■■■□□ 2.18
RAB40C-209ENST00000565511 UBE3CQ15386 1083 aa28.66■■■□□ 2.18
RAB40C-209ENST00000565511 NUDT12Q9BQG2 462 aa28.66■■■□□ 2.18
RAB40C-209ENST00000565511 MAP3K21Q5TCX8 1036 aa28.65■■■□□ 2.18
RAB40C-209ENST00000565511 SIAH1Q8IUQ4 282 aa28.65■■■□□ 2.18
RAB40C-209ENST00000565511 GTF3C2Q8WUA4 911 aaPredicted RBP28.65■■■□□ 2.18
RAB40C-209ENST00000565511 SOCS4Q8WXH5 440 aa28.65■■■□□ 2.18
RAB40C-209ENST00000565511 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.65■■■□□ 2.18
RAB40C-209ENST00000565511 DCTPP1Q9H773 170 aa28.65■■■□□ 2.18
RAB40C-209ENST00000565511 RABGAP1Q9Y3P9 1069 aa28.65■■■□□ 2.18
RAB40C-209ENST00000565511 MNX1P50219 401 aaPredicted RBP28.64■■■□□ 2.18
RAB40C-209ENST00000565511 C12orf60Q5U649 245 aa28.64■■■□□ 2.18
RAB40C-209ENST00000565511 PLEKHH3Q7Z736 793 aa28.64■■■□□ 2.18
RAB40C-209ENST00000565511 ATP8A2Q9NTI2 1148 aa28.64■■■□□ 2.18
RAB40C-209ENST00000565511 USP17L12C9JPN9 530 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 USP17L21D6R901 530 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 PRKAR2AP13861 404 aaKnown RBP28.63■■■□□ 2.17
RAB40C-209ENST00000565511 LBX2Q6XYB7 198 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 PAWRQ96IZ0 340 aaKnown RBP28.63■■■□□ 2.17
RAB40C-209ENST00000565511 ECHDC1Q9NTX5 307 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 PCDHB15Q9Y5E8 787 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 FRMPD3Q5JV73 1810 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 RPTORQ8N122 1335 aa28.63■■■□□ 2.17
RAB40C-209ENST00000565511 GREB1LQ9C091 1923 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-209ENST00000565511 XRCC5P13010 732 aaKnown RBP28.62■■■□□ 2.17
RAB40C-209ENST00000565511 FXR1P51114 621 aaKnown RBP eCLIP28.62■■■□□ 2.17
RAB40C-209ENST00000565511 CHRDL2Q6WN34 429 aa28.62■■■□□ 2.17
RAB40C-209ENST00000565511 HTATIP2Q9BUP3 242 aa28.62■■■□□ 2.17
RAB40C-209ENST00000565511 SWAP70Q9UH65 585 aa28.62■■■□□ 2.17
RAB40C-209ENST00000565511 SLC4A4Q9Y6R1 1079 aa28.62■■■□□ 2.17
RAB40C-209ENST00000565511 RANBP2P49792 3224 aaKnown RBP28.62■■■□□ 2.17
RAB40C-209ENST00000565511 CDK8P49336 464 aa28.61■■■□□ 2.17
RAB40C-209ENST00000565511 TMEM179Q6ZVK1 233 aa28.61■■■□□ 2.17
RAB40C-209ENST00000565511 HMX1Q9NP08 348 aaPredicted RBP28.61■■■□□ 2.17
RAB40C-209ENST00000565511 CACNB2Q08289 660 aaPredicted RBP28.6■■■□□ 2.17
RAB40C-209ENST00000565511 CTR9Q6PD62 1173 aa28.6■■■□□ 2.17
RAB40C-209ENST00000565511 FLRT1Q9NZU1 646 aa28.6■■■□□ 2.17
RAB40C-209ENST00000565511 ZKSCAN1P17029 563 aaPredicted RBP28.59■■■□□ 2.17
RAB40C-209ENST00000565511 RGS2P41220 211 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms