RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CEP126Q9P2H0 1117 aa11.24□□□□□ -0.61
VPS9D1-205ENST00000565452 ZBTB22O15209 634 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 PBX2P40425 430 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 RHBDL3P58872 404 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 GSTO1P78417 241 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 CCDC27Q2M243 656 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 ERICH6Q7L0X2 663 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 RNF180Q86T96 592 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 FOXP4Q8IVH2 680 aaPredicted RBP11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 ANKRD44Q8N8A2 993 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 TOX2Q96NM4 488 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 DHX36Q9H2U1 1008 aaKnown RBP11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 SLC28A3Q9HAS3 691 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 IL16Q14005 1332 aa11.23□□□□□ -0.61
VPS9D1-205ENST00000565452 MROH7-TTC4A0A0A0MT08 1334 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 GRXCR1A8MXD5 290 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 TIMP1P01033 207 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 IGHA2P01877 340 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 PPIGQ13427 754 aaKnown RBP eCLIP11.22□□□□□ -0.614e-6■□□□□ 10.5
VPS9D1-205ENST00000565452 SKIV2LQ15477 1246 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 ATP2B3Q16720 1220 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 RFX7Q2KHR2 1363 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
VPS9D1-205ENST00000565452 SMIM22K7EJ46 135 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 ERC2O15083 957 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 CNMDO75829 334 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 RARBP10826 455 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 PHKA1P46020 1223 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 MRE11P49959 708 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 MECOMQ03112 1051 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 TFF2Q03403 129 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 FAAP100Q0VG06 881 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 TMEM240Q5SV17 173 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 PRAMEF19Q5SWL8 479 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 ANKRD33Q7Z3H0 272 aa11.21□□□□□ -0.61
VPS9D1-205ENST00000565452 KCNQ1P51787 676 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 RASIP1Q5U651 963 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 CCDC102BQ68D86 513 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 CRACR2BQ8N4Y2 399 aaPredicted RBP11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 TMEM199Q8N511 208 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 NUP133Q8WUM0 1156 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 MTIF3Q9H2K0 278 aaKnown RBP11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 XPNPEP3Q9NQH7 507 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 COG5Q9UP83 839 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 A0A1B0GUL6 1792 aa11.2□□□□□ -0.62
VPS9D1-205ENST00000565452 ADORA2AP29274 412 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 USP14P54578 494 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 EXOSC9Q06265 439 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 FAM47AQ5JRC9 791 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 LBX2Q6XYB7 198 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 ZNF365Q70YC5 407 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 C16orf59Q7L2K0 433 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 HOXC10Q9NYD6 342 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 BTBD7Q9P203 1132 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 NRBP1Q9UHY1 535 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 MUC6Q6W4X9 2439 aa11.19□□□□□ -0.62
VPS9D1-205ENST00000565452 MYO9BQ13459 2157 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 PTPRFP10586 1907 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 PI4K2BG5E9Z4 385 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 TLL1O43897 1013 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 CIAO1O76071 339 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 JAG1P78504 1218 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 C12orf42Q96LP6 360 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 FEZ1Q99689 392 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 NKX2-4Q9H2Z4 354 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
VPS9D1-205ENST00000565452 DOCK1Q14185 1865 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 PDS5AQ29RF7 1337 aaKnown RBP11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 PHIPQ8WWQ0 1821 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 GDF11O95390 407 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 BAG3O95817 575 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 PGK1P00558 417 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 FGBP02675 491 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 RFX5P48382 616 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 RASGRF1Q13972 1273 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 ATF7IPQ6VMQ6 1270 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 STARD7Q9NQZ5 370 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms