RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 NRBP1Q9UHY1 535 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 TPCN1Q9ULQ1 816 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 KIAA0232Q92628 1395 aa7.03□□□□□ -1.28
PTPN9-204ENST00000564970 KDM6AO15550 1401 aaPredicted RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 MAGI3Q5TCQ9 1506 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 NUTM2FA1L443 756 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CTAGE15A4D2H0 777 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 PARNO95453 639 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 FAM107AO95990 144 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 MMEP08473 750 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CTAGE8P0CG41 777 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 ALADP13716 330 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 POLR2EP19388 210 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 HOXD10P28358 340 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 OXCT1P55809 520 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 MXRA7P84157 204 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 PDE1BQ01064 536 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 ZBTB17Q13105 803 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 RCN1Q15293 331 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 ADRM1Q16186 407 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CFAP157Q5JU67 520 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 AKNAD1Q5T1N1 836 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 MSL1Q68DK7 614 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 ATL3Q6DD88 541 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 FAAH2Q6GMR7 532 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 C6orf89Q6UWU4 347 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 NCCRP1Q6ZVX7 275 aaPredicted RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CTAGE6Q86UF2 777 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CCAR1Q8IX12 1150 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CTAGE4Q8IX94 777 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 IGSF22Q8N9C0 903 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 NSUN7Q8NE18 718 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 MORC4Q8TE76 937 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 ITPKCQ96DU7 683 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 IQCDQ96DY2 449 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 FAM163AQ96GL9 167 aaPredicted RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 KAT14Q9H8E8 782 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 SH2B1Q9NRF2 756 aaPredicted RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 GALNT8Q9NY28 637 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 NDUFA13Q9P0J0 144 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 CARD8Q9Y2G2 431 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 BZW2Q9Y6E2 419 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 PIK3R4Q99570 1358 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 RIMS1Q86UR5 1692 aaKnown RBP7.02□□□□□ -1.29
PTPN9-204ENST00000564970 KAT6BQ8WYB5 2073 aa7.02□□□□□ -1.29
PTPN9-204ENST00000564970 GRIN2DO15399 1336 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ERBINQ96RT1 1412 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 LMTK2Q8IWU2 1503 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 BTBD19C9JJ37 291 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 UBAP1LF5GYI3 381 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ATP9BO43861 1147 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 STX10O60499 249 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 USO1O60763 962 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 CLASP2O75122 1294 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 WDHD1O75717 1129 aaPredicted RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 STAM2O75886 525 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 MBD4O95243 580 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ATP6V1G2O95670 118 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 SYF2O95926 243 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 RPSAP08865 295 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 LINGO3P0C6S8 592 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 TCF7P36402 384 aaPredicted RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 NEK4P51957 841 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 GNGT1P63211 74 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 SLC7A5Q01650 507 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 CBX3Q13185 183 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 NNTQ13423 1086 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 COL19A1Q14993 1142 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 NONOQ15233 471 aaKnown RBP eCLIP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 MAP7D1Q3KQU3 841 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 CCDC122Q5T0U0 273 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ZFYVE27Q5T4F4 411 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 PPP4R3AQ6IN85 833 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 PACS1Q6VY07 963 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 KDM7AQ6ZMT4 941 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 TMC6Q7Z403 805 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ALDH16A1Q8IZ83 802 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 TTC39CQ8N584 583 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 DIS3LQ8TF46 1054 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 SPIRE2Q8WWL2 714 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 NCSTNQ92542 709 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 RUNDC1Q96C34 613 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 RBM33Q96EV2 1170 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 CLIC6Q96NY7 704 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 NAA15Q9BXJ9 866 aaKnown RBP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ANKZF1Q9H8Y5 726 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 NOD2Q9HC29 1040 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ABCB6Q9NP58 842 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 DDX21Q9NR30 783 aaKnown RBP eCLIP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 AATFQ9NY61 560 aaKnown RBP eCLIP7.01□□□□□ -1.29
PTPN9-204ENST00000564970 SLC5A4Q9NY91 659 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 SLAIN2Q9P270 581 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 HPCAL4Q9UM19 191 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 RABL2BQ9UNT1 228 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 ITM2BQ9Y287 266 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 PPME1Q9Y570 386 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
PTPN9-204ENST00000564970 IKBKGQ9Y6K9 419 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms