RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 IVLP07476 585 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 RTN1Q16799 776 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MSANTD4Q8NCY6 345 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MMS19Q96T76 1030 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 RAB21Q9UL25 225 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 FAM237AA0A1B0GTK4 181 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 ZNF185O15231 689 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MBD4O95243 580 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MICALL1Q8N3F8 863 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PAGE5Q96GU1 130 aa23.19■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MATR3P43243 847 aaKnown RBP eCLIP23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 KRT31Q15323 416 aa23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MAGEB6Q8N7X4 407 aa23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PSMB7Q99436 277 aa23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PDE6AP16499 860 aa23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 IRX3P78415 501 aaPredicted RBP23.18■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MINDY4BA8MYZ0 360 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 HNRNPLLQ8WVV9 542 aaKnown RBP23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PLIN2Q99541 437 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MYH8P13535 1937 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 ATP1A1P05023 1023 aaKnown RBP23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 ARHGAP25P42331 645 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 GREM2Q9H772 168 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 EPB41L4AQ9HCS5 686 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 FMNL1O95466 1100 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MYBL2P10244 700 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 TDO2P48775 406 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 RILPL1Q5EBL4 403 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 ABHD10Q9NUJ1 306 aa23.17■■□□□ 1.3
MAP1LC3B-206ENST00000564844 USP5P45974 858 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 UBXN1Q04323 297 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 SLC4A8Q2Y0W8 1093 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 GPATCH11Q8N954 259 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 CCDC148Q8NFR7 591 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 CAGE1Q8TC20 777 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 SRPRBQ9Y5M8 271 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PLEKHG2Q9H7P9 1386 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 LIG3P49916 1009 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 TOM1L2Q6ZVM7 507 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 IFNL3Q8IZI9 196 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 JRKLQ9Y4A0 524 aa23.16■■□□□ 1.3
MAP1LC3B-206ENST00000564844 TRIM49BA6NDI0 452 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 SYF2O95926 243 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 GGCXP38435 758 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 CTR9Q6PD62 1173 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 CNGA4Q8IV77 575 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 AFAP1L1Q8TED9 768 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 DUSP10Q9Y6W6 482 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 PPP1R3GB7ZBB8 358 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 WTAPQ15007 396 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 MFSD6Q6ZSS7 791 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 FAM71BQ8TC56 605 aa23.15■■□□□ 1.3
MAP1LC3B-206ENST00000564844 CUL4BQ13620 913 aa23.14■■□□□ 1.3
MAP1LC3B-206ENST00000564844 NT5DC1Q5TFE4 455 aa23.14■■□□□ 1.3
MAP1LC3B-206ENST00000564844 TMEM87BQ96K49 555 aa23.14■■□□□ 1.3
MAP1LC3B-206ENST00000564844 GDAQ9Y2T3 454 aa23.14■■□□□ 1.3
MAP1LC3B-206ENST00000564844 POTEB2H3BUK9 544 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 MYO1BO43795 1136 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ITGA6P23229 1130 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ERCC5P28715 1186 aaPredicted RBP23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PIP4K2BP78356 416 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SHISA4Q96DD7 197 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 GNL3LQ9NVN8 582 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TTF2Q9UNY4 1162 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 MACROD2A1Z1Q3 448 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CCT5P48643 541 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 STRBPQ96SI9 672 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 MEGF6O75095 1541 aa23.14■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TRIM75PA6NK02 468 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CIAO1O76071 339 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 IFNAR1P17181 557 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 BRD2P25440 801 aaKnown RBP23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 MAGEA9P43362 315 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PPARAQ07869 468 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TCIRG1Q13488 830 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CCDC122Q5T0U0 273 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ICE2Q659A1 982 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TBC1D2BQ9UPU7 963 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ERCC3P19447 782 aa23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 EPN1Q9Y6I3 576 aaPredicted RBP23.13■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CYP27A1Q02318 531 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KCTD19Q17RG1 926 aaPredicted RBP23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 REXO2Q9Y3B8 237 aaKnown RBP23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 V9GY48 417 aaPredicted RBP23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PBX1P40424 430 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CRACR2BQ8N4Y2 399 aaPredicted RBP23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 C2orf54Q08AI8 447 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 EFCC1Q9HA90 598 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 JADE2Q9NQC1 790 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SMARCAL1Q9NZC9 954 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SAMM50Q9Y512 469 aa23.12■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ERICH2A1L162 156 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CYP26C1Q6V0L0 522 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TMTC1Q8IUR5 882 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CRACR2AQ9BSW2 395 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 NAA15Q9BXJ9 866 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms