RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	GUCY1A2	P33402	732 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	CAP2	P40123	477 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	MAP3K11	Q16584	847 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	NOL9	Q5SY16	702 aa	Known RBP	11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	IFIT1B	Q5T764	474 aa	Known RBP	11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	USP48	Q86UV5	1035 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	KLRG1	Q96E93	195 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZNF274	Q96GC6	653 aa	Predicted RBP	11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	CEP95	Q96GE4	821 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZKSCAN3	Q9BRR0	538 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	KANSL2	Q9H9L4	492 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	SENP2	Q9HC62	589 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	MTMR4	Q9NYA4	1195 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	TPCN1	Q9ULQ1	816 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	SYNPO2	Q9UMS6	1093 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	PASK	Q96RG2	1323 aa		11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	KLF18	A0A0U1RQI7	1052 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	DDAH1	O94760	285 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	LARGE1	O95461	756 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	TTLL1	O95922	423 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	GH2	P01242	217 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	ASNS	P08243	561 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	JAG1	P78504	1218 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	APOBR	Q0VD83	1088 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	ME3	Q16798	604 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	PRAMEF18	Q5VWM3	479 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	MAP1S	Q66K74	1059 aa	Predicted RBP	11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	APOA5	Q6Q788	366 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	TMX3	Q96JJ7	454 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	CABP5	Q9NP86	173 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	CREBZF	Q9NS37	354 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	NYAP2	Q9P242	653 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	BRPF3	Q9ULD4	1205 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	MYH4	Q9Y623	1939 aa		11.54	□□□□□ -0.56
SIN3A-205	ENST00000564778	CCDC69	A6NI79	296 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	GOLGA8B	A8MQT2	603 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	MPHOSPH10	O00566	681 aa	Known RBP	11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	PPP1R12B	O60237	982 aa	Predicted RBP	11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	PFKFB2	O60825	505 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	ITGBL1	O95965	494 aa	Predicted RBP	11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	TOP1	P11387	765 aa	Known RBP	11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	PDIA3	P30101	505 aa	Known RBP	11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	NF2	P35240	595 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	ICA1	Q05084	483 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	ST3GAL1	Q11201	340 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	TROAP	Q12815	778 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	CUL4A	Q13619	759 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	SEPT2	Q15019	361 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	DLK2	Q6UY11	383 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	SCYL3	Q8IZE3	742 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZNF654	Q8IZM8	581 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	GTF3C6	Q969F1	213 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	MKL1	Q969V6	931 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	WRNIP1	Q96S55	665 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	TMEM47	Q9BQJ4	181 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	STX8	Q9UNK0	236 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	HPS5	Q9UPZ3	1129 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	SLC12A7	Q9Y666	1083 aa		11.53	□□□□□ -0.56
SIN3A-205	ENST00000564778	PHIP	Q8WWQ0	1821 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	UNCX	A6NJT0	531 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	ZBTB43	O43298	467 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	USP2	O75604	605 aa	Predicted RBP	11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	INPP5B	P32019	993 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	IREB2	P48200	963 aa	Known RBP	11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	FKBP1B	P68106	108 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	HTRA3	P83110	453 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	NFXL1	Q6ZNB6	911 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	NOL8	Q76FK4	1167 aa	Known RBP	11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	CATIP	Q7Z7H3	387 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	CLEC10A	Q8IUN9	316 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	SIAH1	Q8IUQ4	282 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	DNAJC5G	Q8N7S2	189 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	IPO9	Q96P70	1041 aa	Known RBP	11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	MAP3K14	Q99558	947 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	TRPM7	Q96QT4	1865 aa		11.52	□□□□□ -0.57
SIN3A-205	ENST00000564778	TMEM88B	A6NKF7	163 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	CALM1	P0DP23	149 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	CALM2	P0DP24	149 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	CALM3	P0DP25	149 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	SNHG28	P0DPA3	235 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	EEF2	P13639	858 aa	Known RBP	11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	MAP3K9	P80192	1104 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	SCRN1	Q12765	414 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	RAB3GAP1	Q15042	981 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	PPP2R5B	Q15173	497 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	MICU3	Q86XE3	530 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	PNMA1	Q8ND90	353 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	INTS4	Q96HW7	963 aa	Known RBP	11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	LARP6	Q9BRS8	491 aa	Known RBP	11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	KAT14	Q9H8E8	782 aa		11.51	□□□□□ -0.57
SIN3A-205	ENST00000564778	GOLGA8A	A7E2F4	631 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	TRAF5	O00463	557 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	METAP2	P50579	478 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	VGLL4	Q14135	290 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	GRM4	Q14833	912 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	SYNE3	Q6ZMZ3	975 aa		11.5	□□□□□ -0.57
SIN3A-205	ENST00000564778	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms