RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 SYCE3A1L190 88 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SH2B2O14492 632 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CPLX1O14810 134 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GADD45BO75293 160 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CDKL5O76039 1030 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NF2P35240 595 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DYNLL1P63167 89 aaKnown RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MAP2K1Q02750 393 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TCP10Q12799 353 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 RESTQ13127 1097 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 RASA3Q14644 834 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CCDC183Q5T5S1 534 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CPLX2Q6PUV4 134 aaKnown RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 LRSAM1Q6UWE0 723 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PAXIP1Q6ZW49 1069 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MIGA1Q8NAN2 632 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 STAG1Q8WVM7 1258 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 FAM163AQ96GL9 167 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SCAND2PQ9GZW5 306 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DEFB129Q9H1M3 183 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NCOA5Q9HCD5 579 aaKnown RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GBA2Q9HCG7 927 aaPredicted RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 AATFQ9NY61 560 aaKnown RBP eCLIP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NAV1Q8NEY1 1877 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CDK5RAP2Q96SN8 1893 aa8.66□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GPR75-ASB3A0A0A6YYF3 556 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 B4E1Z4 1266 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 DTNBO60941 627 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 IGSF3O75054 1194 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 LETM1O95202 739 aaPredicted RBP8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CTDNEP1O95476 244 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 BAG3O95817 575 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NFIAQ12857 509 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 GRM1Q13255 1194 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SART3Q15020 963 aaKnown RBP8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 AKNAD1Q5T1N1 836 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 CST9Q5W186 159 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MFSD6Q6ZSS7 791 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ADGRA1Q86SQ6 560 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SH3RF3Q8TEJ3 882 aaPredicted RBP8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 SPATA32Q96LK8 384 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 MTA3Q9BTC8 594 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PANK2Q9BZ23 570 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 TMEM39BQ9GZU3 492 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PPP2R3BQ9Y5P8 575 aa8.65□□□□□ -1.02
MAP1LC3B-205ENST00000564638 PAPPA2Q9BXP8 1791 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 GOLGA6L4A6NEF3 574 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 PRKAB2O43741 272 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 PLCG2P16885 1265 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 USP5P45974 858 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 METAP2P50579 478 aaKnown RBP eCLIP8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 FOSBP53539 338 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 SOX10P56693 466 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 RHBDL3P58872 404 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CTDSPL2Q05D32 466 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 PPARAQ07869 468 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 ATL3Q6DD88 541 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 MOB2Q70IA6 237 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CYB5R4Q7L1T6 521 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 TTC6Q86TZ1 520 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CDAN1Q8IWY9 1227 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 TSPY26PQ9H489 355 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 DDX4Q9NQI0 724 aaKnown RBP8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 TOMM22Q9NS69 142 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CFAP45Q9UL16 551 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 FZD1Q9UP38 647 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 MYH1P12882 1939 aa8.64□□□□□ -1.03
MAP1LC3B-205ENST00000564638 NID2Q14112 1375 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 ERICH2A1L162 156 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CCDC69A6NI79 296 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 GOLGA8AA7E2F4 631 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 UBE2Q2LH0YL09 131 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 IFIT3O14879 490 aaKnown RBP8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 ZBTB43O43298 467 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 KDM4AO75164 1064 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 WDHD1O75717 1129 aaPredicted RBP8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 PCP11498 1178 aaKnown RBP8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 HUNKP57058 714 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CCDC173Q0VFZ6 552 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 SLC4A8Q2Y0W8 1093 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 SUPT20HL1Q3ZLR7 823 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 RRP12Q5JTH9 1297 aaKnown RBP8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 FKBP1CQ5VVH2 108 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 APOA5Q6Q788 366 aa8.63□□□□□ -1.03
MAP1LC3B-205ENST00000564638 SYNE3Q6ZMZ3 975 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms