RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 BOLA2Q9H3K6 86 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
SPG7-210ENST00000564409 PAK6Q9NQU5 681 aaPredicted RBP18.12■□□□□ 0.49
SPG7-210ENST00000564409 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
SPG7-210ENST00000564409 XRCC5P13010 732 aaKnown RBP18.11■□□□□ 0.49
SPG7-210ENST00000564409 UBE3CQ15386 1083 aa18.11■□□□□ 0.49
SPG7-210ENST00000564409 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
SPG7-210ENST00000564409 CCAR1Q8IX12 1150 aaKnown RBP18.11■□□□□ 0.49
SPG7-210ENST00000564409 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
SPG7-210ENST00000564409 DDRGK1Q96HY6 314 aa18.11■□□□□ 0.49
SPG7-210ENST00000564409 RBPJLQ9UBG7 517 aa18.11■□□□□ 0.49
SPG7-210ENST00000564409 RABGAP1Q9Y3P9 1069 aa18.11■□□□□ 0.49
SPG7-210ENST00000564409 PLXNB2O15031 1838 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 ERVK-24P63145 666 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 CCNA1P78396 465 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 LBX2Q6XYB7 198 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 LCORLQ8N3X6 602 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 NUDT12Q9BQG2 462 aa18.1■□□□□ 0.49
SPG7-210ENST00000564409 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
SPG7-210ENST00000564409 CEP290O15078 2479 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 FARP2O94887 1054 aaPredicted RBP18.09■□□□□ 0.49
SPG7-210ENST00000564409 SDR42E1Q8WUS8 393 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 CRISPLD2Q9H0B8 497 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 DCTPP1Q9H773 170 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 ECHDC1Q9NTX5 307 aa18.09■□□□□ 0.49
SPG7-210ENST00000564409 RPTORQ8N122 1335 aa18.08■□□□□ 0.49
SPG7-210ENST00000564409 GLRX3O76003 335 aaKnown RBP18.08■□□□□ 0.48
SPG7-210ENST00000564409 MBD4O95243 580 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 TFRCP02786 760 aaKnown RBP18.08■□□□□ 0.48
SPG7-210ENST00000564409 HABP4Q5JVS0 413 aaKnown RBP18.08■□□□□ 0.48
SPG7-210ENST00000564409 CATSPERGQ6ZRH7 1159 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 TMEM179Q6ZVK1 233 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 ANKLE1Q8NAG6 615 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 EDC3Q96F86 508 aaKnown RBP18.08■□□□□ 0.48
SPG7-210ENST00000564409 CCDC17Q96LX7 622 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 DEFB118Q96PH6 123 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.08■□□□□ 0.48
SPG7-210ENST00000564409 BCL11AQ9H165 835 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 ARMT1Q9H993 441 aa18.08■□□□□ 0.48
SPG7-210ENST00000564409 VCAM1P19320 739 aa18.07■□□□□ 0.48
SPG7-210ENST00000564409 GUCY1A2P33402 732 aa18.07■□□□□ 0.48
SPG7-210ENST00000564409 DPF3Q92784 378 aa18.07■□□□□ 0.48
SPG7-210ENST00000564409 HMX1Q9NP08 348 aaPredicted RBP18.07■□□□□ 0.48
SPG7-210ENST00000564409 NR2E3Q9Y5X4 410 aa18.07■□□□□ 0.48
SPG7-210ENST00000564409 RGS2P41220 211 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 SEPT2Q15019 361 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 ZYXQ15942 572 aaKnown RBP18.06■□□□□ 0.48
SPG7-210ENST00000564409 Q3C1V9 767 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 PLEKHH3Q7Z736 793 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 ACER1Q8TDN7 264 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 PAGR1Q9BTK6 254 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 SH2D4AQ9H788 454 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 HOXC10Q9NYD6 342 aa18.06■□□□□ 0.48
SPG7-210ENST00000564409 MPHOSPH10O00566 681 aaKnown RBP18.05■□□□□ 0.48
SPG7-210ENST00000564409 MORN1Q5T089 497 aa18.05■□□□□ 0.48
SPG7-210ENST00000564409 C12orf60Q5U649 245 aa18.05■□□□□ 0.48
SPG7-210ENST00000564409 GPR142Q7Z601 462 aa18.05■□□□□ 0.48
SPG7-210ENST00000564409 LPAR1Q92633 364 aa18.05■□□□□ 0.48
SPG7-210ENST00000564409 USP6NLQ92738 828 aa18.05■□□□□ 0.48
SPG7-210ENST00000564409 RPAP3Q9H6T3 665 aaPredicted RBP18.05■□□□□ 0.48
SPG7-210ENST00000564409 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
SPG7-210ENST00000564409 H0YGN5 161 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 CYP2B6P20813 491 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 COG2Q14746 738 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
SPG7-210ENST00000564409 MAP3K21Q5TCX8 1036 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 TRIB2Q92519 343 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 APBA2Q99767 749 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 PORCNQ9H237 461 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
SPG7-210ENST00000564409 USP17L12C9JPN9 530 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 USP17L21D6R901 530 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 PRKAB2O43741 272 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
SPG7-210ENST00000564409 ZFYP08048 801 aaPredicted RBP18.03■□□□□ 0.48
SPG7-210ENST00000564409 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
SPG7-210ENST00000564409 GIMAP6Q6P9H5 292 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 POTEEQ6S8J3 1075 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 C16orf86Q6ZW13 317 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 NECAB2Q7Z6G3 386 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 MB21D1Q8N884 522 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 KBTBD3Q8NAB2 608 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 ARPP21Q9UBL0 812 aaPredicted RBP18.03■□□□□ 0.48
SPG7-210ENST00000564409 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 IVNS1ABPQ9Y6Y0 642 aa18.03■□□□□ 0.48
SPG7-210ENST00000564409 SLC15A5A6NIM6 579 aa18.02■□□□□ 0.48
SPG7-210ENST00000564409 SPDYE16A6NNV3 312 aaPredicted RBP18.02■□□□□ 0.48
SPG7-210ENST00000564409 CNMDO75829 334 aa18.02■□□□□ 0.48
SPG7-210ENST00000564409 CYP2D6P10635 497 aa18.02■□□□□ 0.48
SPG7-210ENST00000564409 CDK8P49336 464 aa18.02■□□□□ 0.48
SPG7-210ENST00000564409 MAP2K5Q13163 448 aa18.02■□□□□ 0.48
SPG7-210ENST00000564409 TTC41PQ6P2S7 1318 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 A0A1W2PRG0 241 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 STRNO43815 780 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 PRKAR2AP13861 404 aaKnown RBP18.01■□□□□ 0.47
SPG7-210ENST00000564409 ICA1Q05084 483 aa18.01■□□□□ 0.47
SPG7-210ENST00000564409 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms