RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	MAP2K7	O14733	419 aa		4.72	□□□□□ -1.65
MACF1-231	ENST00000564288	RNF8	O76064	485 aa		4.72	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF483	Q8TF39	744 aa	Predicted RBP	4.72	□□□□□ -1.65
MACF1-231	ENST00000564288	EPB41	P11171	864 aa	Known RBP	4.72	□□□□□ -1.65
MACF1-231	ENST00000564288	CASP14	P31944	242 aa		4.72	□□□□□ -1.65
MACF1-231	ENST00000564288	POLK	Q9UBT6	870 aa		4.72	□□□□□ -1.65
MACF1-231	ENST00000564288	MDH1	P40925	334 aa	Known RBP	4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	SLC4A8	Q2Y0W8	1093 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	NRDE2	Q9H7Z3	1164 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	A2ML1	A8K2U0	1454 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	STK26	Q9P289	416 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	SLC12A7	Q9Y666	1083 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	RIPK1	Q13546	671 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	FRA10AC1	Q70Z53	315 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	ZNF713	Q8N859	430 aa	Predicted RBP	4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	GSTA1	P08263	222 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	NME8	Q8N427	588 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	FAM212A	Q96EL1	285 aa		4.71	□□□□□ -1.65
MACF1-231	ENST00000564288	KLHL33	A6NCF5	533 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SART1	O43290	800 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ROR2	Q01974	943 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	NUGGC	Q68CJ6	796 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	MUM1	Q2TAK8	710 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ANKRD20A3	Q5VUR7	823 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	DRC3	Q9H069	523 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	RNF216	Q9NWF9	866 aa	Predicted RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	KDM5A	P29375	1690 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SREK1	Q8WXA9	508 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	MRFAP1	Q9Y605	127 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	STRN	O43815	780 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	GGCX	P38435	758 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	LRIG3	Q6UXM1	1119 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	NEUROD6	Q96NK8	337 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	CNNM2	Q9H8M5	875 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	PDP2	Q9P2J9	529 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SHROOM2	Q13796	1616 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	STK3	Q13188	491 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	FAF1	Q9UNN5	650 aa	Predicted RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	C21orf2	O43822	256 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	LARP6	Q9BRS8	491 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	FAM114A2	Q9NRY5	505 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	USP14	P54578	494 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	TRIM75P	A6NK02	468 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ATP2C2	O75185	946 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	MYSM1	Q5VVJ2	828 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	INTS9	Q9NV88	658 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SNX14	Q9Y5W7	946 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ZWINT	O95229	277 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	NR1H3	Q13133	447 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ZNF579	Q8NAF0	562 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ATP6V0A1	Q93050	837 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	ATP7B	P35670	1465 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	RUSC2	Q8N2Y8	1516 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC160	A6NGH7	325 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SMARCA5	O60264	1052 aa	Predicted RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	MTIF2	P46199	727 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	TRPC3	Q13507	836 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	MAIP1	Q8WWC4	291 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	IL1RAPL1	Q9NZN1	696 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	NUP153	P49790	1475 aa	Known RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	RILPL1	Q5EBL4	403 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	RRAGB	Q5VZM2	374 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	AHCYL1	O43865	530 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	TAF11	Q15544	211 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	TMCO5A	Q8N6Q1	288 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	VTI1A	Q96AJ9	217 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	CATSPER2	Q96P56	530 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	NUB1	Q9Y5A7	615 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	OPHN1	O60890	802 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	COG7	P83436	770 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC28B	Q9BUN5	200 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	LAMB3	Q13751	1172 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	FAM81A	Q8TBF8	368 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	SCIN	Q9Y6U3	715 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	IL9R	Q01113	521 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	TNIP1	Q15025	636 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	PPP1R21	Q6ZMI0	780 aa		4.71	□□□□□ -1.66
MACF1-231	ENST00000564288	NAIF1	Q69YI7	327 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	HVCN1	Q96D96	273 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	GNA14	O95837	355 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SLC9C1	Q4G0N8	1177 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TBC1D5	Q92609	795 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	PLCH2	O75038	1416 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SETBP1	Q9Y6X0	1596 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SPG7	Q9UQ90	795 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TTF1	Q15361	905 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	OLFM3	Q96PB7	478 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TMEM232	C9JQI7	657 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	GYS2	P54840	703 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	FGFR1OP2	Q9NVK5	253 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	TSGA10IP	Q3SY00	556 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SAMD1	Q6SPF0	538 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	VSTM4	Q8IW00	320 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	MYBL2	P10244	700 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	EDEM3	Q9BZQ6	932 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	CHL1	O00533	1208 aa		4.7	□□□□□ -1.66
MACF1-231	ENST00000564288	SOX12	O15370	315 aa		4.7	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms