RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 CTNND1O60716 968 aaKnown RBP23.26■■□□□ 1.31
SLX1A-204ENST00000563995 GABPAQ06546 454 aa23.26■■□□□ 1.31
SLX1A-204ENST00000563995 VPS53Q5VIR6 699 aa23.26■■□□□ 1.31
SLX1A-204ENST00000563995 TRIM47Q96LD4 638 aa23.26■■□□□ 1.31
SLX1A-204ENST00000563995 SRRDQ9UH36 339 aa23.26■■□□□ 1.31
SLX1A-204ENST00000563995 RAD50Q92878 1312 aa23.26■■□□□ 1.31
SLX1A-204ENST00000563995 COL6A3P12111 3177 aa23.26■■□□□ 1.31
SLX1A-204ENST00000563995 CYP2D7A0A087X1C5 515 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 ECM2O94769 699 aaPredicted RBP23.25■■□□□ 1.31
SLX1A-204ENST00000563995 OSBPP22059 807 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 PSMC4P43686 418 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 MTFR1Q15390 333 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 RUFY2Q8WXA3 655 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 NAPBQ9H115 298 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 TAOK2Q9UL54 1235 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 A0A0C4DFX4 3053 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 DOCK3Q8IZD9 2030 aa23.25■■□□□ 1.31
SLX1A-204ENST00000563995 HSPD1P10809 573 aaKnown RBP23.24■■□□□ 1.31
SLX1A-204ENST00000563995 SCYL3Q8IZE3 742 aa23.24■■□□□ 1.31
SLX1A-204ENST00000563995 IL25Q9H293 177 aa23.24■■□□□ 1.31
SLX1A-204ENST00000563995 RRP1BQ14684 758 aaKnown RBP23.23■■□□□ 1.31
SLX1A-204ENST00000563995 ALX1Q15699 326 aa23.23■■□□□ 1.31
SLX1A-204ENST00000563995 TATDN1Q6P1N9 297 aa23.23■■□□□ 1.31
SLX1A-204ENST00000563995 SWAP70Q9UH65 585 aa23.23■■□□□ 1.31
SLX1A-204ENST00000563995 RANBP2P49792 3224 aaKnown RBP23.22■■□□□ 1.31
SLX1A-204ENST00000563995 SMIM22K7EJ46 135 aa23.22■■□□□ 1.31
SLX1A-204ENST00000563995 SHMT1P34896 483 aa23.22■■□□□ 1.31
SLX1A-204ENST00000563995 CAP2P40123 477 aa23.22■■□□□ 1.31
SLX1A-204ENST00000563995 DYNLL2Q96FJ2 89 aa23.22■■□□□ 1.31
SLX1A-204ENST00000563995 ZMYM6O95789 1325 aa23.22■■□□□ 1.31
SLX1A-204ENST00000563995 ROBO3Q96MS0 1386 aa23.22■■□□□ 1.31
SLX1A-204ENST00000563995 MINDY4BA8MYZ0 360 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 BCRP11274 1271 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 GRK4P32298 578 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 GPAT2Q6NUI2 795 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 C16orf86Q6ZW13 317 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 PICK1Q9NRD5 415 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 MYPNQ86TC9 1320 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 ATAD5Q96QE3 1844 aa23.21■■□□□ 1.31
SLX1A-204ENST00000563995 A0A1W2PPC1 479 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 SOX1O00570 391 aaPredicted RBP23.2■■□□□ 1.3
SLX1A-204ENST00000563995 SGSM2O43147 1006 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 HOXD10P28358 340 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 UBE2Q1Q7Z7E8 422 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 SLC44A5Q8NCS7 719 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 RAET1EQ8TD07 263 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 LRCH3Q96II8 777 aa23.2■■□□□ 1.3
SLX1A-204ENST00000563995 PARK7Q99497 189 aaKnown RBP23.2■■□□□ 1.3
SLX1A-204ENST00000563995 CXCL11O14625 94 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 GDF11O95390 407 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 FMNL1O95466 1100 aaPredicted RBP23.19■■□□□ 1.3
SLX1A-204ENST00000563995 FGAP02671 866 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 PTPRAP18433 802 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 CDK8P49336 464 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 PPARAQ07869 468 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 CERKLQ49MI3 558 aaPredicted RBP23.19■■□□□ 1.3
SLX1A-204ENST00000563995 DSCC1Q9BVC3 393 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 GINM1Q9NU53 330 aa23.19■■□□□ 1.3
SLX1A-204ENST00000563995 ALPK3Q96L96 1907 aa23.18■■□□□ 1.3
SLX1A-204ENST00000563995 CDC45O75419 566 aa23.18■■□□□ 1.3
SLX1A-204ENST00000563995 GJA8P48165 433 aa23.18■■□□□ 1.3
SLX1A-204ENST00000563995 NKX2-3Q8TAU0 364 aa23.18■■□□□ 1.3
SLX1A-204ENST00000563995 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.18■■□□□ 1.3
SLX1A-204ENST00000563995 LOC285556D6RIA3 1793 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 GJB1P08034 283 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 ASNSP08243 561 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 CYP2C8P10632 490 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 JAG1P78504 1218 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 PRKCZQ05513 592 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 SHROOM1Q2M3G4 852 aaPredicted RBP23.17■■□□□ 1.3
SLX1A-204ENST00000563995 HTATIP2Q9BUP3 242 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 ZBTB21Q9ULJ3 1066 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 NR2E3Q9Y5X4 410 aa23.17■■□□□ 1.3
SLX1A-204ENST00000563995 A0A0G2JLL6 359 aaPredicted RBP23.16■■□□□ 1.3
SLX1A-204ENST00000563995 CCL5P13501 91 aa23.16■■□□□ 1.3
SLX1A-204ENST00000563995 FCGRTP55899 365 aa23.16■■□□□ 1.3
SLX1A-204ENST00000563995 ABCB5Q2M3G0 1257 aa23.16■■□□□ 1.3
SLX1A-204ENST00000563995 CASC1Q6TDU7 716 aa23.16■■□□□ 1.3
SLX1A-204ENST00000563995 PRRT2Q7Z6L0 340 aaPredicted RBP23.16■■□□□ 1.3
SLX1A-204ENST00000563995 ESYT1Q9BSJ8 1104 aa23.16■■□□□ 1.3
SLX1A-204ENST00000563995 COL25A1Q9BXS0 654 aaPredicted RBP23.16■■□□□ 1.3
SLX1A-204ENST00000563995 ANAPC4Q9UJX5 808 aa23.16■■□□□ 1.3
SLX1A-204ENST00000563995 GH2P01242 217 aa23.15■■□□□ 1.3
SLX1A-204ENST00000563995 SLC3A2P08195 630 aaKnown RBP23.15■■□□□ 1.3
SLX1A-204ENST00000563995 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
SLX1A-204ENST00000563995 TBC1D2Q9BYX2 928 aa23.15■■□□□ 1.3
SLX1A-204ENST00000563995 GABRQQ9UN88 632 aa23.15■■□□□ 1.3
SLX1A-204ENST00000563995 ZHX2Q9Y6X8 837 aa23.15■■□□□ 1.3
SLX1A-204ENST00000563995 MYH8P13535 1937 aa23.15■■□□□ 1.3
SLX1A-204ENST00000563995 USP17L5A8MUK1 530 aa23.14■■□□□ 1.29
SLX1A-204ENST00000563995 CCDC84Q86UT8 332 aaPredicted RBP23.14■■□□□ 1.29
SLX1A-204ENST00000563995 SLAIN1Q8ND83 568 aa23.14■■□□□ 1.29
SLX1A-204ENST00000563995 CCDC17Q96LX7 622 aa23.14■■□□□ 1.29
SLX1A-204ENST00000563995 ZNF287Q9HBT7 754 aa23.14■■□□□ 1.29
SLX1A-204ENST00000563995 CABP5Q9NP86 173 aa23.14■■□□□ 1.29
SLX1A-204ENST00000563995 AFG3L2Q9Y4W6 797 aa23.14■■□□□ 1.29
SLX1A-204ENST00000563995 UBXN2AP68543 259 aa23.13■■□□□ 1.29
SLX1A-204ENST00000563995 CTDSPL2Q05D32 466 aa23.13■■□□□ 1.29
SLX1A-204ENST00000563995 PDE4BQ07343 736 aa23.13■■□□□ 1.29
SLX1A-204ENST00000563995 FASTKD5Q7L8L6 764 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms