RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
SMG1-208ENST00000563448 CDC27P30260 824 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 METAP2P50579 478 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMG1-208ENST00000563448 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 MIGA2Q7L4E1 593 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 CCDC144CPQ8IYA2 1237 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 TMEM47Q9BQJ4 181 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
SMG1-208ENST00000563448 SMC3Q9UQE7 1217 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 PITPNM2Q9BZ72 1349 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 PAPPA2Q9BXP8 1791 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 GOLGA8AA7E2F4 631 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
SMG1-208ENST00000563448 JAK2O60674 1132 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 GDF11O95390 407 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 GJB2P29033 226 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 EPHX2P34913 555 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 JAG1P78504 1218 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 TROAPQ12815 778 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 USP50Q70EL3 339 aaPredicted RBP11.89□□□□□ -0.51
SMG1-208ENST00000563448 CLEC10AQ8IUN9 316 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 NSUN7Q8NE18 718 aaKnown RBP11.89□□□□□ -0.51
SMG1-208ENST00000563448 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 LLPHQ9BRT6 129 aaKnown RBP11.89□□□□□ -0.51
SMG1-208ENST00000563448 MTMR4Q9NYA4 1195 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 STX8Q9UNK0 236 aa11.89□□□□□ -0.51
SMG1-208ENST00000563448 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
SMG1-208ENST00000563448 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
SMG1-208ENST00000563448 RCAN1P53805 252 aa11.88□□□□□ -0.51
SMG1-208ENST00000563448 ABCB5Q2M3G0 1257 aa11.88□□□□□ -0.51
SMG1-208ENST00000563448 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
SMG1-208ENST00000563448 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
SMG1-208ENST00000563448 NUP133Q8WUM0 1156 aa11.88□□□□□ -0.51
SMG1-208ENST00000563448 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
SMG1-208ENST00000563448 DDAH1O94760 285 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 NTRK3Q16288 839 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 PRAMEF18Q5VWM3 479 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 TAF1DQ9H5J8 278 aaPredicted RBP11.87□□□□□ -0.51
SMG1-208ENST00000563448 CHMP5Q9NZZ3 219 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 PPP2R3BQ9Y5P8 575 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 SSC5DA1L4H1 1573 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 PTPDC1A2A3K4 754 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 CALM1P0DP23 149 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 CALM2P0DP24 149 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 CALM3P0DP25 149 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 TOP1P11387 765 aaKnown RBP11.87□□□□□ -0.51
SMG1-208ENST00000563448 SEPT2Q15019 361 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 RTN1Q16799 776 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 TMEM179Q6ZVK1 233 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 CHMP4CQ96CF2 233 aa11.87□□□□□ -0.51
SMG1-208ENST00000563448 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
SMG1-208ENST00000563448 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
SMG1-208ENST00000563448 TTLL1O95922 423 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 GH2P01242 217 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
SMG1-208ENST00000563448 PKP1Q13835 747 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 DCPSQ96C86 337 aaKnown RBP11.86□□□□□ -0.51
SMG1-208ENST00000563448 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 CLIP2Q9UDT6 1046 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 PPFIA3O75145 1194 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 CAP2P40123 477 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 DLK2Q6UY11 383 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 SIAH1Q8IUQ4 282 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 CABP5Q9NP86 173 aa11.86□□□□□ -0.51
SMG1-208ENST00000563448 ADM5C9JUS6 153 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 CPLX1O14810 134 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 EEF2P13639 858 aaKnown RBP11.85□□□□□ -0.51
SMG1-208ENST00000563448 GRM4Q14833 912 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 PPP2R5BQ15173 497 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
SMG1-208ENST00000563448 LRRC47Q8N1G4 583 aaKnown RBP11.85□□□□□ -0.51
SMG1-208ENST00000563448 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
SMG1-208ENST00000563448 MKL1Q969V6 931 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 RBM28Q9NW13 759 aaKnown RBP11.85□□□□□ -0.51
SMG1-208ENST00000563448 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 ZBTB21Q9ULJ3 1066 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
SMG1-208ENST00000563448 PTPRFP10586 1907 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 PLEKHA8P1O95397 391 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 IFNAR1P17181 557 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
SMG1-208ENST00000563448 ICA1Q05084 483 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 RAB3GAP1Q15042 981 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 EAPPQ56P03 285 aaPredicted RBP11.84□□□□□ -0.51
SMG1-208ENST00000563448 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 RASGRP2Q7LDG7 609 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
SMG1-208ENST00000563448 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
SMG1-208ENST00000563448 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.84□□□□□ -0.51
SMG1-208ENST00000563448 MAD2L2Q9UI95 211 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms