RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
SNX29-202ENST00000563308 A0A0G2JLL6 359 aaPredicted RBP12.42□□□□□ -0.42
SNX29-202ENST00000563308 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
SNX29-202ENST00000563308 CNGA1P29973 690 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 PRRT2Q7Z6L0 340 aaPredicted RBP12.42□□□□□ -0.42
SNX29-202ENST00000563308 ARRDC4Q8NCT1 418 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 DBNDD2Q9BQY9 259 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 PBX4Q9BYU1 374 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 CWC22Q9HCG8 908 aaKnown RBP12.42□□□□□ -0.42
SNX29-202ENST00000563308 PDLIM7Q9NR12 457 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 MYH2Q9UKX2 1941 aa12.42□□□□□ -0.42
SNX29-202ENST00000563308 TLL1O43897 1013 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 GFRA3O60609 400 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
SNX29-202ENST00000563308 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
SNX29-202ENST00000563308 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNX29-202ENST00000563308 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 GORABQ5T7V8 394 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 LPAR1Q92633 364 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 MFSD14AQ96MC6 490 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
SNX29-202ENST00000563308 LRRC37A2A6NM11 1700 aa12.4□□□□□ -0.42
SNX29-202ENST00000563308 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
SNX29-202ENST00000563308 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
SNX29-202ENST00000563308 UQCRFS1P1P0C7P4 283 aa12.4□□□□□ -0.42
SNX29-202ENST00000563308 PICALMQ13492 652 aa12.4□□□□□ -0.42
SNX29-202ENST00000563308 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
SNX29-202ENST00000563308 HLA-CQ95604 372 aa12.4□□□□□ -0.42
SNX29-202ENST00000563308 SNRKQ9NRH2 765 aa12.4□□□□□ -0.42
SNX29-202ENST00000563308 TRIM43BA6NCK2 446 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 CYP2E1P05181 493 aaPredicted RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 PTPRAP18433 802 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 PBX2P40425 430 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 RGS2P41220 211 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 PTPN5P54829 565 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 GSTO1P78417 241 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 MFSD14CQ5VZR4 134 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 TRIM43Q96BQ3 446 aaPredicted RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 EAF2Q96CJ1 260 aaPredicted RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 ZNF512BQ96KM6 892 aaPredicted RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 TLR7Q9NYK1 1049 aaKnown RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 RAI14Q9P0K7 980 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 DDX20Q9UHI6 824 aaKnown RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
SNX29-202ENST00000563308 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 PLXNA1Q9UIW2 1896 aa12.39□□□□□ -0.43
SNX29-202ENST00000563308 CACNA1BQ00975 2339 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 TBC1D12O60347 775 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 KRT37O76014 449 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
SNX29-202ENST00000563308 LDHCP07864 332 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 CLTBP09497 229 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 ADGRA1Q86SQ6 560 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
SNX29-202ENST00000563308 GJD3Q8N144 294 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.38□□□□□ -0.43
SNX29-202ENST00000563308 AFG3L2Q9Y4W6 797 aa12.38□□□□□ -0.43
SNX29-202ENST00000563308 DOCK2Q92608 1830 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 FAM196BA6NMK8 535 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 CTNND1O60716 968 aaKnown RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 ZAP70P43403 619 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 EPHB4P54760 987 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 OS9Q13438 667 aaPredicted RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 TTC39AQ5SRH9 613 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 GJC2Q5T442 439 aaPredicted RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 COL26A1Q96A83 441 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 PRRX2Q99811 253 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 CCDC8Q9H0W5 538 aaPredicted RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 MTIF3Q9H2K0 278 aaKnown RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
SNX29-202ENST00000563308 LRP2BPQ9P2M1 347 aa12.37□□□□□ -0.43
SNX29-202ENST00000563308 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 GRXCR1A8MXD5 290 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 PPP4CP60510 307 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 CCDC158Q5M9N0 1113 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 CCDC84Q86UT8 332 aaPredicted RBP12.36□□□□□ -0.43
SNX29-202ENST00000563308 TEX11Q8IYF3 940 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 TMEM39AQ9NV64 488 aa12.36□□□□□ -0.43
SNX29-202ENST00000563308 TLE2Q04725 743 aa12.35□□□□□ -0.43
SNX29-202ENST00000563308 NAA16Q6N069 864 aaPredicted RBP12.35□□□□□ -0.43
SNX29-202ENST00000563308 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
SNX29-202ENST00000563308 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNX29-202ENST00000563308 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
SNX29-202ENST00000563308 MAPK4P31152 587 aa12.34□□□□□ -0.43
SNX29-202ENST00000563308 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.434e-7■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms