RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 DLEC1Q9Y238 1755 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 SNAP23O00161 211 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 NPHP1O15259 732 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 DDAH1O94760 285 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 NTSR2O95665 410 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 GNG11P61952 73 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 GOLGA8FQ08AF8 430 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 GOLGA8DPQ0D2H9 430 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 TUBB2AQ13885 445 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 UBE4AQ14139 1066 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 FILIP1LQ4L180 1135 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 IQCA1Q86XH1 822 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 CCDC82Q8N4S0 544 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 MED15Q96RN5 788 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 TUBB2BQ9BVA1 445 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 DUOX1Q9NRD9 1551 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 SAMSN1Q9NSI8 373 aaKnown RBP14.9□□□□□ -0.02
USB1-207ENST00000563149 FHOD1Q9Y613 1164 aa14.9□□□□□ -0.02
USB1-207ENST00000563149 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 HSPA2P54652 639 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 ADKP55263 362 aaKnown RBP14.89□□□□□ -0.03
USB1-207ENST00000563149 CUL4BQ13620 913 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 IFIT1BQ5T764 474 aaKnown RBP14.89□□□□□ -0.03
USB1-207ENST00000563149 DHX58Q96C10 678 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 CCDC51Q96ER9 411 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 PAGE5Q96GU1 130 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 RIOK1Q9BRS2 568 aaKnown RBP14.89□□□□□ -0.03
USB1-207ENST00000563149 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
USB1-207ENST00000563149 MRFAP1Q9Y605 127 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 WNK3Q9BYP7 1800 aa14.89□□□□□ -0.03
USB1-207ENST00000563149 FANCGO15287 622 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 CCDC175P0C221 793 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 PNMA6AP0CW24 399 aaPredicted RBP14.88□□□□□ -0.03
USB1-207ENST00000563149 PBX1P40424 430 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 TRAPPC10P48553 1259 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 TUBB4BP68371 445 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 DPYDQ12882 1025 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 CDKAL1Q5VV42 579 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 APTXQ7Z2E3 356 aaKnown RBP14.88□□□□□ -0.03
USB1-207ENST00000563149 PPFIBP1Q86W92 1011 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 TRMT44Q8IYL2 757 aaKnown RBP14.88□□□□□ -0.03
USB1-207ENST00000563149 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 CMTR1Q8N1G2 835 aaKnown RBP14.88□□□□□ -0.03
USB1-207ENST00000563149 ENAHQ8N8S7 591 aaPredicted RBP14.88□□□□□ -0.03
USB1-207ENST00000563149 ITIH6Q6UXX5 1313 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 SYNRGQ9UMZ2 1314 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 DOT1LQ8TEK3 1739 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 ATP2B1P20020 1258 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 JAKMIP3Q5VZ66 844 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 TOGARAM2Q6ZUX3 1019 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 USP49Q70CQ1 688 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 SDR42E1Q8WUS8 393 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 KIFC2Q96AC6 838 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
USB1-207ENST00000563149 ADD3Q9UEY8 706 aaKnown RBP14.88□□□□□ -0.03
USB1-207ENST00000563149 CRKLP46109 303 aaKnown RBP14.87□□□□□ -0.03
USB1-207ENST00000563149 NT5C2P49902 561 aa14.87□□□□□ -0.03
USB1-207ENST00000563149 ATP2C1P98194 919 aaPredicted RBP14.87□□□□□ -0.03
USB1-207ENST00000563149 PPP2R3AQ06190 1150 aa14.87□□□□□ -0.03
USB1-207ENST00000563149 RSRC2Q7L4I2 434 aaKnown RBP14.87□□□□□ -0.03
USB1-207ENST00000563149 RABGGTAQ92696 567 aa14.87□□□□□ -0.03
USB1-207ENST00000563149 SYMPKQ92797 1274 aaKnown RBP14.87□□□□□ -0.03
USB1-207ENST00000563149 TNFRSF25Q93038 417 aa14.87□□□□□ -0.03
USB1-207ENST00000563149 SHISA4Q96DD7 197 aa14.87□□□□□ -0.03
USB1-207ENST00000563149 A0A087X0B3 334 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 FECHP22830 423 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 SPAG1Q07617 926 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 TROAPQ12815 778 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 CAVIN4Q5BKX8 364 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 TTC38Q5R3I4 469 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 TMTC3Q6ZXV5 915 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 ADGRA1Q86SQ6 560 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 CNGA4Q8IV77 575 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 IGSF22Q8N9C0 903 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 EPSTI1Q96J88 318 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 WDR24Q96S15 920 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 ABCF2Q9UG63 623 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 NIP7Q9Y221 180 aaKnown RBP eCLIP14.86□□□□□ -0.03
USB1-207ENST00000563149 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 V9GY48 417 aaPredicted RBP14.86□□□□□ -0.03
USB1-207ENST00000563149 CACNA1SQ13698 1873 aa14.86□□□□□ -0.03
USB1-207ENST00000563149 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 PPP1R3GB7ZBB8 358 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 ORC4O43929 436 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 AFMP43652 599 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 PTPN21Q16825 1174 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 ANKRD18AQ8IVF6 992 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 IQUBQ8NA54 791 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 GOLGA1Q92805 767 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 IQSEC3Q9UPP2 1182 aaPredicted RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 ADGRG1Q9Y653 693 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 CCDC66A2RUB6 948 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 LRRC10BA6NIK2 292 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 TEX33O43247 280 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 IGSF3O75054 1194 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 ATP6V1AP38606 617 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms