RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 USP17L10C9JJH3 530 aa20.73■□□□□ 0.91
CCNDBP1-204ENST00000563065 ZNF213O14771 459 aa20.73■□□□□ 0.91
CCNDBP1-204ENST00000563065 BACE1P56817 501 aa20.73■□□□□ 0.91
CCNDBP1-204ENST00000563065 PTPRFP10586 1907 aa20.72■□□□□ 0.91
CCNDBP1-204ENST00000563065 TFAP4Q01664 338 aa20.72■□□□□ 0.91
CCNDBP1-204ENST00000563065 TREML2Q5T2D2 321 aa20.72■□□□□ 0.91
CCNDBP1-204ENST00000563065 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
CCNDBP1-204ENST00000563065 LSG1Q9H089 658 aaKnown RBP20.72■□□□□ 0.91
CCNDBP1-204ENST00000563065 PDHXO00330 501 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 FGRP09769 529 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 HSPA8P11142 646 aaKnown RBP20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 RRP12Q5JTH9 1297 aaKnown RBP20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 OTUD7BQ6GQQ9 843 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 FASTKD5Q7L8L6 764 aaKnown RBP20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 MAP4K1Q92918 833 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 ZNF287Q9HBT7 754 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 TOMM22Q9NS69 142 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 EMILIN3Q9NT22 766 aa20.71■□□□□ 0.91
CCNDBP1-204ENST00000563065 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 EEF2P13639 858 aaKnown RBP20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 LBX1P52954 281 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 ATP2B2Q01814 1243 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 ICA1Q05084 483 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 SH3D19Q5HYK7 790 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 AKNAD1Q5T1N1 836 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 ANKRD23Q86SG2 305 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 FEZ1Q99689 392 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 CTNNA3Q9UI47 895 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 TAF6LQ9Y6J9 622 aa20.7■□□□□ 0.9
CCNDBP1-204ENST00000563065 NMT2O60551 498 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 TSPY3P0CV98 308 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 TSPY8P0CW00 308 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 CRHR2Q13324 411 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 IMMTQ16891 758 aaKnown RBP20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 KIAA1755Q5JYT7 1200 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 NEDD1Q8NHV4 660 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 STAG1Q8WVM7 1258 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 ANO2Q9NQ90 1003 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 SAGE1Q9NXZ1 904 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 RBM8AQ9Y5S9 174 aaKnown RBP20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 NEDD4P46934 1319 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 IGKV6D-41A0A0C4DH26 115 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 C19orf81C9J6K1 198 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 CA12O43570 354 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 ORC4O43929 436 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 ALDH1A1P00352 501 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 TAF1CQ15572 869 aaPredicted RBP20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 USP17L2Q6R6M4 530 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 CASC1Q6TDU7 716 aa20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 U3KPZ7 1027 aaPredicted RBP20.69■□□□□ 0.9
CCNDBP1-204ENST00000563065 TSPY2A6NKD2 308 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 CYP21A2P08686 494 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 CYP2C8P10632 490 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 CTCFP49711 727 aaPredicted RBP20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 PROCA1Q8NCQ7 364 aaPredicted RBP20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 KIAA1683Q9H0B3 1180 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 IL17RBQ9NRM6 502 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 TMOD4Q9NZQ9 345 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 AGTPBP1Q9UPW5 1226 aa20.68■□□□□ 0.9
CCNDBP1-204ENST00000563065 GREB1LQ9C091 1923 aaPredicted RBP20.67■□□□□ 0.9
CCNDBP1-204ENST00000563065 MTMR4Q9NYA4 1195 aa20.67■□□□□ 0.9
CCNDBP1-204ENST00000563065 CLIP2Q9UDT6 1046 aa20.67■□□□□ 0.9
CCNDBP1-204ENST00000563065 ARHGEF10LQ9HCE6 1279 aa20.66■□□□□ 0.9
CCNDBP1-204ENST00000563065 TMX2Q9Y320 296 aa20.66■□□□□ 0.9
CCNDBP1-204ENST00000563065 SPICE1Q8N0Z3 855 aa20.65■□□□□ 0.9
CCNDBP1-204ENST00000563065 CFHR5Q9BXR6 569 aa20.65■□□□□ 0.9
CCNDBP1-204ENST00000563065 RNF41Q9H4P4 317 aaPredicted RBP20.65■□□□□ 0.9
CCNDBP1-204ENST00000563065 ZFYVE28Q9HCC9 887 aa20.65■□□□□ 0.9
CCNDBP1-204ENST00000563065 NYAP2Q9P242 653 aa20.65■□□□□ 0.9
CCNDBP1-204ENST00000563065 LAMA4Q16363 1823 aa20.65■□□□□ 0.9
CCNDBP1-204ENST00000563065 B4E1Z4 1266 aa20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 USP14P54578 494 aa20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 C12orf42Q96LP6 360 aa20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 ZCCHC17Q9NP64 241 aaKnown RBP20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 PLIN4Q96Q06 1357 aa20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 LOC285556D6RIA3 1793 aa20.64■□□□□ 0.89
CCNDBP1-204ENST00000563065 GPR25O00155 361 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 RAD21O60216 631 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 KDM4AO75164 1064 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 VCAM1P19320 739 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 STOX1Q6ZVD7 989 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 CHMP4CQ96CF2 233 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 ASCC2Q9H1I8 757 aaPredicted RBP20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 CPA4Q9UI42 421 aa20.63■□□□□ 0.89
CCNDBP1-204ENST00000563065 TTLL1O95922 423 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 PCP11498 1178 aaKnown RBP20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 NECTIN1Q15223 517 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 LRRC47Q8N1G4 583 aaKnown RBP20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 VCPKMTQ9H867 229 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 ZSWIM5Q9P217 1185 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 SLC45A1Q9Y2W3 748 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 CASP8AP2Q9UKL3 1982 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 E7EWF7 191 aa20.62■□□□□ 0.89
CCNDBP1-204ENST00000563065 SLC27A2O14975 620 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms