RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
KLHDC4-209ENST00000562872 U2AF1L4Q8WU68 220 aaKnown RBP13.38□□□□□ -0.27
KLHDC4-209ENST00000562872 COA7Q96BR5 231 aa13.38□□□□□ -0.27
KLHDC4-209ENST00000562872 PORCNQ9H237 461 aa13.38□□□□□ -0.27
KLHDC4-209ENST00000562872 A0A1W2PRG0 241 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 CNMDO75829 334 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 UBXN2AP68543 259 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 USP17L2Q6R6M4 530 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 C12orf42Q96LP6 360 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 FEZ1Q99689 392 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
KLHDC4-209ENST00000562872 VCAM1P19320 739 aa13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 KIAA1755Q5JYT7 1200 aa13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 TRIB2Q92519 343 aa13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 DEFB118Q96PH6 123 aa13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 PUS7LQ9H0K6 701 aaKnown RBP13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 PAK6Q9NQU5 681 aaPredicted RBP13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
KLHDC4-209ENST00000562872 BAZ2AQ9UIF9 1905 aaKnown RBP13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 H0YGN5 161 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 SGPL1O95470 568 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 AKR1B1P15121 316 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 CYP2B6P20813 491 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 ERVK-24P63145 666 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
KLHDC4-209ENST00000562872 MPHOSPH10O00566 681 aaKnown RBP13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 FARP2O94887 1054 aaPredicted RBP13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 CCL14Q16627 93 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 HABP4Q5JVS0 413 aaKnown RBP13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 CATSPERGQ6ZRH7 1159 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 SIAH1Q8IUQ4 282 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 DIS3LQ8TF46 1054 aaKnown RBP13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 USP6NLQ92738 828 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 CABP5Q9NP86 173 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 BTBD7Q9P203 1132 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 MYH7P12883 1935 aa13.34□□□□□ -0.27
KLHDC4-209ENST00000562872 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L21D6R901 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 HMGCRP04035 888 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
KLHDC4-209ENST00000562872 USP14P54578 494 aa13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 MORN1Q5T089 497 aa13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 CTR9Q6PD62 1173 aa13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 CEP290O15078 2479 aa13.32□□□□□ -0.28
KLHDC4-209ENST00000562872 RANBP2P49792 3224 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 MAPK4P31152 587 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 CDK8P49336 464 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 RRP1P56182 461 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 MAP3K21Q5TCX8 1036 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 PLEKHH3Q7Z736 793 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 DPF3Q92784 378 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 STRBPQ96SI9 672 aaKnown RBP13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 RABGAP1Q9Y3P9 1069 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 RLFQ13129 1914 aa13.31□□□□□ -0.28
KLHDC4-209ENST00000562872 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 M0R2C6 588 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 ICA1Q05084 483 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 LBX2Q6XYB7 198 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 STK11IPQ8N1F8 1099 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 SOCS4Q8WXH5 440 aa13.3□□□□□ -0.28
KLHDC4-209ENST00000562872 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms