RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 ICA1Q05084 483 aa13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 TMEM179Q6ZVK1 233 aa13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 CTU1Q7Z7A3 348 aaKnown RBP13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 CD99L2Q8TCZ2 262 aa13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 CPA4Q9UI42 421 aa13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
SNAPC5-204ENST00000562411 HIP1O00291 1037 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 TLR2O60603 784 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 BACE1P56817 501 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 PPARAQ07869 468 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 SH3D19Q5HYK7 790 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 TICAM2Q86XR7 235 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 ACER1Q8TDN7 264 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 ERO1AQ96HE7 468 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 MCOLN1Q9GZU1 580 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 SLC45A1Q9Y2W3 748 aa13.05□□□□□ -0.32
SNAPC5-204ENST00000562411 PRDM1O75626 825 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 RASA1P20936 1047 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 SP3Q02447 781 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 PABPC4Q13310 644 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 ZMYM6O95789 1325 aa13.04□□□□□ -0.32
SNAPC5-204ENST00000562411 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 USP14P54578 494 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 IRX3P78415 501 aaPredicted RBP13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 KIAA1683Q9H0B3 1180 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 TRIM17Q9Y577 477 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 RAD50Q92878 1312 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 PLIN4Q96Q06 1357 aa13.03□□□□□ -0.32
SNAPC5-204ENST00000562411 VCAM1P19320 739 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 OSBPP22059 807 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 LACTBP83111 547 aaPredicted RBP13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 PDE4BQ07343 736 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 C12orf42Q96LP6 360 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 ARHGAP39Q9C0H5 1083 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 IL25Q9H293 177 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 SH2D4AQ9H788 454 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
SNAPC5-204ENST00000562411 A0A1W2PRG0 241 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 HAND2P61296 217 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 CAP1Q01518 475 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 KIF22Q14807 665 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 OTOP1Q7RTM1 612 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 ANKRD13CQ8N6S4 541 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 ABHD8Q96I13 439 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 TANGO6Q9C0B7 1094 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 COL11A1P12107 1806 aaPredicted RBP13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 RLFQ13129 1914 aa13.01□□□□□ -0.33
SNAPC5-204ENST00000562411 RAD21O60216 631 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 FGAP02671 866 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 TSPY3P0CV98 308 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 TSPY8P0CW00 308 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 BCRP11274 1271 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
SNAPC5-204ENST00000562411 CHMLP26374 656 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 ALX1Q15699 326 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 ZNF444Q8N0Y2 327 aaPredicted RBP13□□□□□ -0.33
SNAPC5-204ENST00000562411 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 GNL3Q9BVP2 549 aaKnown RBP eCLIP13□□□□□ -0.33
SNAPC5-204ENST00000562411 RPAP3Q9H6T3 665 aaPredicted RBP13□□□□□ -0.33
SNAPC5-204ENST00000562411 KANSL2Q9H9L4 492 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 EFCC1Q9HA90 598 aa13□□□□□ -0.33
SNAPC5-204ENST00000562411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
SNAPC5-204ENST00000562411 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 NEDD4P46934 1319 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 HERVK_113P62684 666 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 FAM110CQ1W6H9 321 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 VCPKMTQ9H867 229 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 ANAPC4Q9UJX5 808 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 TACC3Q9Y6A5 838 aa12.99□□□□□ -0.33
SNAPC5-204ENST00000562411 IGKV6D-41A0A0C4DH26 115 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
SNAPC5-204ENST00000562411 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms