RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 DLL1O00548 723 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 IDH1O75874 414 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 CCND3P30281 292 aaPredicted RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 USP5P45974 858 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 CCNA1P78396 465 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 LHX8Q68G74 356 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 TATDN1Q6P1N9 297 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 DEFB123Q8N688 67 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 SERPINB13Q9UIV8 391 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 NOP58Q9Y2X3 529 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 LAMA2P24043 3122 aaKnown RBP12.53□□□□□ -0.4
BBS4-205ENST00000562219 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
BBS4-205ENST00000562219 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 GLRX3O76003 335 aaKnown RBP12.52□□□□□ -0.41
BBS4-205ENST00000562219 VCAM1P19320 739 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP14P54578 494 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 RAB3GAP1Q15042 981 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
BBS4-205ENST00000562219 LRRC26Q2I0M4 334 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.41
BBS4-205ENST00000562219 MAGEB6Q8N7X4 407 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
BBS4-205ENST00000562219 CUL9Q8IWT3 2517 aa12.51□□□□□ -0.41
BBS4-205ENST00000562219 CNMDO75829 334 aa12.51□□□□□ -0.41
BBS4-205ENST00000562219 CERKLQ49MI3 558 aaPredicted RBP12.51□□□□□ -0.41
BBS4-205ENST00000562219 Q7L0L9 218 aa12.51□□□□□ -0.41
BBS4-205ENST00000562219 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
BBS4-205ENST00000562219 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
BBS4-205ENST00000562219 UNC80Q8N2C7 3258 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 SLC15A5A6NIM6 579 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 GRB14Q14449 540 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 MFSD14CQ5VZR4 134 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 TTC6Q86TZ1 520 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 FTSJ3Q8IY81 847 aaKnown RBP12.5□□□□□ -0.41
BBS4-205ENST00000562219 EDC3Q96F86 508 aaKnown RBP12.5□□□□□ -0.41
BBS4-205ENST00000562219 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 STXBP5LQ9Y2K9 1186 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 IVNS1ABPQ9Y6Y0 642 aa12.5□□□□□ -0.41
BBS4-205ENST00000562219 SPDYE16A6NNV3 312 aaPredicted RBP12.49□□□□□ -0.41
BBS4-205ENST00000562219 MSCO60682 206 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 HOXC6P09630 235 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 PTPREP23469 700 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 SHMT1P34896 483 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 ITPRIPQ8IWB1 547 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 ACER1Q8TDN7 264 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 RPAP3Q9H6T3 665 aaPredicted RBP12.49□□□□□ -0.41
BBS4-205ENST00000562219 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 MTMR10Q9NXD2 777 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 BTBD7Q9P203 1132 aa12.49□□□□□ -0.41
BBS4-205ENST00000562219 DDX20Q9UHI6 824 aaKnown RBP12.49□□□□□ -0.41
BBS4-205ENST00000562219 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
BBS4-205ENST00000562219 ERC1Q8IUD2 1116 aa12.48□□□□□ -0.41
BBS4-205ENST00000562219 LPAR1Q92633 364 aa12.48□□□□□ -0.41
BBS4-205ENST00000562219 ANTXR1Q9H6X2 564 aa12.48□□□□□ -0.41
BBS4-205ENST00000562219 SMCHD1A6NHR9 2005 aa12.48□□□□□ -0.41
BBS4-205ENST00000562219 DNM1LO00429 736 aa12.47□□□□□ -0.41
BBS4-205ENST00000562219 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
BBS4-205ENST00000562219 PLCD1P51178 756 aa12.47□□□□□ -0.41
BBS4-205ENST00000562219 ATP2B2Q01814 1243 aa12.47□□□□□ -0.41
BBS4-205ENST00000562219 AACSQ86V21 672 aa12.47□□□□□ -0.41
BBS4-205ENST00000562219 LBHD1Q9BQE6 289 aaPredicted RBP12.47□□□□□ -0.41
BBS4-205ENST00000562219 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
BBS4-205ENST00000562219 SENP6Q9GZR1 1112 aaPredicted RBP12.47□□□□□ -0.41
BBS4-205ENST00000562219 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 IGHA2P01877 340 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
BBS4-205ENST00000562219 RLBP1P12271 317 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 CYBAP13498 195 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 CNGA1P29973 690 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 CYP2C19P33261 490 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 GABPAQ06546 454 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 SEPT2Q15019 361 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
BBS4-205ENST00000562219 CEP85Q6P2H3 762 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.41
BBS4-205ENST00000562219 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms