RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 MSCO60682 206 aa24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 GLRX3O76003 335 aaKnown RBP24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 GH2P01242 217 aa24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 IGHA2P01877 340 aa24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 HOXC6P09630 235 aa24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 CCNA1P78396 465 aa24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 ATP11BQ9Y2G3 1177 aa24.68■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L15C9J2P7 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L13C9JLJ4 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L11C9JVI0 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L18D6R9N7 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L22D6RA61 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L17D6RBQ6 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L19D6RCP7 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L20D6RJB6 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 UQCRFS1P1P0C7P4 283 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 ATP2B2Q01814 1243 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 USP17L24Q0WX57 530 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 GRB14Q14449 540 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 TTYH1Q9H313 450 aaPredicted RBP24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 BTBD7Q9P203 1132 aa24.67■■□□□ 1.54
PDXDC1-207ENST00000562119 GJC2Q5T442 439 aaPredicted RBP24.66■■□□□ 1.54
PDXDC1-207ENST00000562119 CATSPERGQ6ZRH7 1159 aa24.66■■□□□ 1.54
PDXDC1-207ENST00000562119 MYLIPQ8WY64 445 aa24.66■■□□□ 1.54
PDXDC1-207ENST00000562119 PRDM6Q9NQX0 595 aa24.66■■□□□ 1.54
PDXDC1-207ENST00000562119 GNAI3P08754 354 aa24.65■■□□□ 1.54
PDXDC1-207ENST00000562119 CYBAP13498 195 aa24.65■■□□□ 1.54
PDXDC1-207ENST00000562119 CDK5RAP2Q96SN8 1893 aa24.65■■□□□ 1.54
PDXDC1-207ENST00000562119 TTC28Q96AY4 2481 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 CYP2E1P05181 493 aaPredicted RBP24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 HLA-DOAP06340 250 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 VCAM1P19320 739 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 DYNLL1P63167 89 aaKnown RBP24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 LBX2Q6XYB7 198 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 SLC39A5Q6ZMH5 540 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 TRMT2AQ8IZ69 625 aaKnown RBP24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 BADQ92934 168 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 FEZ1Q99689 392 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 IVNS1ABPQ9Y6Y0 642 aa24.64■■□□□ 1.54
PDXDC1-207ENST00000562119 FOCADQ5VW36 1801 aa24.63■■□□□ 1.53
PDXDC1-207ENST00000562119 TATDN1Q6P1N9 297 aa24.63■■□□□ 1.53
PDXDC1-207ENST00000562119 ACER1Q8TDN7 264 aa24.63■■□□□ 1.53
PDXDC1-207ENST00000562119 PRDM5Q9NQX1 630 aaPredicted RBP24.63■■□□□ 1.53
PDXDC1-207ENST00000562119 PNMA6EA0A0J9YXQ4 647 aa24.62■■□□□ 1.53
PDXDC1-207ENST00000562119 SMAD3P84022 425 aaKnown RBP24.62■■□□□ 1.53
PDXDC1-207ENST00000562119 TRIM60Q495X7 471 aa24.62■■□□□ 1.53
PDXDC1-207ENST00000562119 ANO1Q5XXA6 986 aa24.62■■□□□ 1.53
PDXDC1-207ENST00000562119 KIAA1683Q9H0B3 1180 aa24.62■■□□□ 1.53
PDXDC1-207ENST00000562119 SPDYE16A6NNV3 312 aaPredicted RBP24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 G3BP1Q13283 466 aaKnown RBP eCLIP24.61■■□□□ 1.531e-7■■□□□ 13.1
PDXDC1-207ENST00000562119 SNX17Q15036 470 aa24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 TTC39AQ5SRH9 613 aa24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 ATF7IPQ6VMQ6 1270 aa24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 SH3RF1Q7Z6J0 888 aa24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 ARRDC4Q8NCT1 418 aa24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 RLFQ13129 1914 aa24.61■■□□□ 1.53
PDXDC1-207ENST00000562119 CT47B1P0C2W7 299 aaPredicted RBP24.6■■□□□ 1.53
PDXDC1-207ENST00000562119 USP14P54578 494 aa24.6■■□□□ 1.53
PDXDC1-207ENST00000562119 RAB3GAP1Q15042 981 aa24.6■■□□□ 1.53
PDXDC1-207ENST00000562119 DBNDD2Q9BQY9 259 aa24.6■■□□□ 1.53
PDXDC1-207ENST00000562119 PIH1D3Q9NQM4 214 aaKnown RBP24.6■■□□□ 1.53
PDXDC1-207ENST00000562119 PDLIM7Q9NR12 457 aa24.6■■□□□ 1.53
PDXDC1-207ENST00000562119 TRIM43BA6NCK2 446 aa24.59■■□□□ 1.53
PDXDC1-207ENST00000562119 TRIM43Q96BQ3 446 aaPredicted RBP24.59■■□□□ 1.53
PDXDC1-207ENST00000562119 RPAP3Q9H6T3 665 aaPredicted RBP24.59■■□□□ 1.53
PDXDC1-207ENST00000562119 KBTBD13C9JR72 458 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 FOSL2P15408 326 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 ADORA2AP29274 412 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 ZAP70P43403 619 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 OLFML2BQ68BL8 750 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 DPP9Q86TI2 863 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 SERPINB13Q9UIV8 391 aa24.58■■□□□ 1.53
PDXDC1-207ENST00000562119 TNNI3KQ59H18 835 aa24.57■■□□□ 1.52
PDXDC1-207ENST00000562119 CCDC158Q5M9N0 1113 aa24.57■■□□□ 1.52
PDXDC1-207ENST00000562119 MOV10L1Q9BXT6 1211 aaKnown RBP24.57■■□□□ 1.52
PDXDC1-207ENST00000562119 EHD4Q9H223 541 aa24.57■■□□□ 1.52
PDXDC1-207ENST00000562119 FPGT-TNNI3KV9GXZ4 949 aa24.57■■□□□ 1.52
PDXDC1-207ENST00000562119 SEPT4O43236 478 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 COBLO75128 1261 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 MYCNP04198 464 aaPredicted RBP24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 GNAI2P04899 355 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 CYP7A1P22680 504 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 ITGB8P26012 769 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 ADCYAP1R1P41586 468 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 RARSP54136 660 aaKnown RBP24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 ABCB5Q2M3G0 1257 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 CERKLQ49MI3 558 aaPredicted RBP24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 MIGA1Q8NAN2 632 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 ARHGAP45Q92619 1136 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 FERMT2Q96AC1 680 aa24.56■■□□□ 1.52
PDXDC1-207ENST00000562119 GUCY1A2P33402 732 aa24.55■■□□□ 1.52
PDXDC1-207ENST00000562119 PRAMEF19Q5SWL8 479 aa24.55■■□□□ 1.52
PDXDC1-207ENST00000562119 GPR108Q9NPR9 543 aa24.55■■□□□ 1.52
PDXDC1-207ENST00000562119 MYO5AQ9Y4I1 1855 aaKnown RBP24.55■■□□□ 1.52
PDXDC1-207ENST00000562119 STRNO43815 780 aa24.54■■□□□ 1.52
PDXDC1-207ENST00000562119 USP5P45974 858 aa24.54■■□□□ 1.52
PDXDC1-207ENST00000562119 EPHB4P54760 987 aa24.54■■□□□ 1.52
PDXDC1-207ENST00000562119 LRRC41Q15345 812 aa24.54■■□□□ 1.52
PDXDC1-207ENST00000562119 C1orf53Q5VUE5 145 aa24.54■■□□□ 1.52
PDXDC1-207ENST00000562119 ZNF512BQ96KM6 892 aaPredicted RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms