RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 EFCAB13Q8IY85 973 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 ACSBG1Q96GR2 724 aa21.13■□□□□ 0.97
BBS4-204ENST00000562084 EIF3CQ99613 913 aaKnown RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 IRX2Q9BZI1 471 aaPredicted RBP21.13■□□□□ 0.97
BBS4-204ENST00000562084 NUP188Q5SRE5 1749 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 UBN2Q6ZU65 1347 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 GOLGA8AA7E2F4 631 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 ACTN4O43707 911 aaKnown RBP21.12■□□□□ 0.97
BBS4-204ENST00000562084 LIFRP42702 1097 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 SLC9C2Q5TAH2 1124 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 RAB11FIP4Q86YS3 637 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 SLC35F6Q8N357 371 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 CCDC148Q8NFR7 591 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 RPGRIP1Q96KN7 1286 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 SYNRGQ9UMZ2 1314 aa21.12■□□□□ 0.97
BBS4-204ENST00000562084 MMP1P03956 469 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 PRR29P0C7W0 189 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 GTF2A1P52655 376 aaPredicted RBP21.11■□□□□ 0.97
BBS4-204ENST00000562084 LRRC24Q50LG9 513 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 TRMT44Q8IYL2 757 aaKnown RBP21.11■□□□□ 0.97
BBS4-204ENST00000562084 IQSEC3Q9UPP2 1182 aaPredicted RBP21.11■□□□□ 0.97
BBS4-204ENST00000562084 IFNAR1P17181 557 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 PIP4K2AP48426 406 aaPredicted RBP21.11■□□□□ 0.97
BBS4-204ENST00000562084 HSP90AA4PQ58FG1 418 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 LRRC31Q6UY01 552 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 CYP26C1Q6V0L0 522 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 AFAP1L1Q8TED9 768 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 MED15Q96RN5 788 aa21.11■□□□□ 0.97
BBS4-204ENST00000562084 PUS7LQ9H0K6 701 aaKnown RBP21.11■□□□□ 0.97
BBS4-204ENST00000562084 TARSL2A2RTX5 802 aaKnown RBP21.1■□□□□ 0.97
BBS4-204ENST00000562084 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
BBS4-204ENST00000562084 KCNQ2O43526 872 aa21.1■□□□□ 0.97
BBS4-204ENST00000562084 XAGE2Q96GT9 111 aa21.1■□□□□ 0.97
BBS4-204ENST00000562084 MYO6Q9UM54 1294 aa21.1■□□□□ 0.97
BBS4-204ENST00000562084 N4BP1O75113 896 aaKnown RBP21.09■□□□□ 0.97
BBS4-204ENST00000562084 RHOXF2BP0C7M4 288 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 AMPD2Q01433 879 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 SPAG1Q07617 926 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 CUL4BQ13620 913 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 CYB5R4Q7L1T6 521 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 PLCD3Q8N3E9 789 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 PHKBQ93100 1093 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 RHOXF2Q9BQY4 288 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 NBPF3Q9H094 633 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 GEMIN8Q9NWZ8 242 aaKnown RBP21.09■□□□□ 0.97
BBS4-204ENST00000562084 TEX33O43247 280 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 RANBP6O60518 1105 aaKnown RBP21.09■□□□□ 0.97
BBS4-204ENST00000562084 EIF5P55010 431 aaKnown RBP21.09■□□□□ 0.97
BBS4-204ENST00000562084 TTF1Q15361 905 aaPredicted RBP21.09■□□□□ 0.97
BBS4-204ENST00000562084 NFXL1Q6ZNB6 911 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 PTF1AQ7RTS3 328 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 TRIM22Q8IYM9 498 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 IGDCC4Q8TDY8 1250 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 ZNF512BQ96KM6 892 aaPredicted RBP21.09■□□□□ 0.97
BBS4-204ENST00000562084 GSDMAQ96QA5 445 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 FAM204AQ9H8W3 233 aa21.09■□□□□ 0.97
BBS4-204ENST00000562084 NHSQ6T4R5 1651 aa21.08■□□□□ 0.97
BBS4-204ENST00000562084 TOB1P50616 345 aaPredicted RBP21.08■□□□□ 0.97
BBS4-204ENST00000562084 CABP4P57796 275 aa21.08■□□□□ 0.97
BBS4-204ENST00000562084 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
BBS4-204ENST00000562084 SF3B2Q13435 895 aaKnown RBP21.08■□□□□ 0.97
BBS4-204ENST00000562084 DNAJC21Q5F1R6 531 aaKnown RBP21.08■□□□□ 0.97
BBS4-204ENST00000562084 MICU3Q86XE3 530 aa21.08■□□□□ 0.97
BBS4-204ENST00000562084 LY9Q9HBG7 655 aa21.08■□□□□ 0.97
BBS4-204ENST00000562084 AATFQ9NY61 560 aaKnown RBP eCLIP21.08■□□□□ 0.97
BBS4-204ENST00000562084 JRKLQ9Y4A0 524 aa21.08■□□□□ 0.97
BBS4-204ENST00000562084 CASP14P31944 242 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 RCAN1P53805 252 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 ALX1Q15699 326 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 TBC1D10CQ8IV04 446 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 SUGP1Q8IWZ8 645 aaKnown RBP21.07■□□□□ 0.96
BBS4-204ENST00000562084 DIS3L2Q8IYB7 885 aaKnown RBP21.07■□□□□ 0.96
BBS4-204ENST00000562084 SLC26A6Q9BXS9 759 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 FAM217BQ9NTX9 383 aaPredicted RBP21.07■□□□□ 0.96
BBS4-204ENST00000562084 A0A087WUV0 522 aaPredicted RBP21.07■□□□□ 0.96
BBS4-204ENST00000562084 RNF40O75150 1001 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 BMP15O95972 392 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 GYPCP04921 128 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 GUCY2CP25092 1073 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 ADD2P35612 726 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 USP14P54578 494 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 UBE3CQ15386 1083 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 ZNF827Q17R98 1081 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 SH3RF1Q7Z6J0 888 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 MTA3Q9BTC8 594 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 LIMA1Q9UHB6 759 aaKnown RBP21.07■□□□□ 0.96
BBS4-204ENST00000562084 SLC12A7Q9Y666 1083 aa21.07■□□□□ 0.96
BBS4-204ENST00000562084 MYO5AQ9Y4I1 1855 aaKnown RBP21.06■□□□□ 0.96
BBS4-204ENST00000562084 LRRC10BA6NIK2 292 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 LRRIQ3A6PVS8 624 aaPredicted RBP21.06■□□□□ 0.96
BBS4-204ENST00000562084 TRIM37O94972 964 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 ARHGAP25P42331 645 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 ZAP70P43403 619 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 CKAP4Q07065 602 aaKnown RBP21.06■□□□□ 0.96
BBS4-204ENST00000562084 CCDC57Q2TAC2 916 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 TMEM67Q5HYA8 995 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 ANKRD20A12PQ8NF67 263 aa21.06■□□□□ 0.96
BBS4-204ENST00000562084 PSMD14O00487 310 aa21.05■□□□□ 0.96
BBS4-204ENST00000562084 PRPF6O94906 941 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms