RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 PLCD1P51178 756 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 BACE1P56817 501 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 UBXN2AP68543 259 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 FAM110CQ1W6H9 321 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 TSHZ3Q63HK5 1081 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 COA7Q96BR5 231 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
GINS3-204ENST00000561952 PAGR1Q9BTK6 254 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 CRNKL1Q9BZJ0 848 aaKnown RBP9.99□□□□□ -0.81
GINS3-204ENST00000561952 RNF208Q9H0X6 261 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 MCM9Q9NXL9 1143 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 SERPINB13Q9UIV8 391 aa9.99□□□□□ -0.81
GINS3-204ENST00000561952 PLXNB2O15031 1838 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 INHAP05111 366 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 CYP2D6P10635 497 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 CERKLQ49MI3 558 aaPredicted RBP9.98□□□□□ -0.81
GINS3-204ENST00000561952 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 CERS3Q8IU89 383 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 SLAIN1Q8ND83 568 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 SHISA4Q96DD7 197 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 WDR18Q9BV38 432 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 UNC93B1Q9H1C4 597 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 TRPC6Q9Y210 931 aa9.98□□□□□ -0.81
GINS3-204ENST00000561952 TCRBV5S4A2TA0A5A2 114 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 PRKAB2O43741 272 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 IGSF3O75054 1194 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 SHMT1P34896 483 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 GCLCP48506 637 aaPredicted RBP9.97□□□□□ -0.81
GINS3-204ENST00000561952 PDE3AQ14432 1141 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 USP17L2Q6R6M4 530 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 METTL16Q86W50 562 aaKnown RBP9.97□□□□□ -0.81
GINS3-204ENST00000561952 SLC44A5Q8NCS7 719 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.97□□□□□ -0.81
GINS3-204ENST00000561952 DYNLL2Q96FJ2 89 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 P2RX7Q99572 595 aaKnown RBP9.97□□□□□ -0.81
GINS3-204ENST00000561952 CWC22Q9HCG8 908 aaKnown RBP9.97□□□□□ -0.81
GINS3-204ENST00000561952 CABP5Q9NP86 173 aa9.97□□□□□ -0.81
GINS3-204ENST00000561952 CYP2D7A0A087X1C5 515 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 C19orf81C9J6K1 198 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 ATP5JP18859 108 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 ADD2P35612 726 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 HERVK_113P62684 666 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 WDR78Q5VTH9 848 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 TATDN1Q6P1N9 297 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 CLEC10AQ8IUN9 316 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 CCAR1Q8IX12 1150 aaKnown RBP9.96□□□□□ -0.82
GINS3-204ENST00000561952 STK11IPQ8N1F8 1099 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 ACER1Q8TDN7 264 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 HAUS7Q99871 368 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.96□□□□□ -0.82
GINS3-204ENST00000561952 EHD4Q9H223 541 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 TXNRD2Q9NNW7 524 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 DCP1AQ9NPI6 582 aaPredicted RBP9.96□□□□□ -0.82
GINS3-204ENST00000561952 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
GINS3-204ENST00000561952 TTLL13PA6NNM8 815 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 SMIM22K7EJ46 135 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 CYP2B6P20813 491 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 TRIM32Q13049 653 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 SEPT2Q15019 361 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 IER5LQ5T953 404 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 U2AF1L4Q8WU68 220 aaKnown RBP9.95□□□□□ -0.82
GINS3-204ENST00000561952 DEFB118Q96PH6 123 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 GINM1Q9NU53 330 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 COLQQ9Y215 455 aaPredicted RBP9.95□□□□□ -0.82
GINS3-204ENST00000561952 SLC4A4Q9Y6R1 1079 aa9.95□□□□□ -0.82
GINS3-204ENST00000561952 GJB1P08034 283 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 VCAM1P19320 739 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 HOXA7P31268 230 aaPredicted RBP9.94□□□□□ -0.82
GINS3-204ENST00000561952 GUCY1A2P33402 732 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 GJA8P48165 433 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 ERVK-9P63128 1117 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 ERVK-24P63145 666 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 ATP2B2Q01814 1243 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 Q3C1V9 767 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 GPRC5AQ8NFJ5 357 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 DPF3Q92784 378 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 PORCNQ9H237 461 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 RPAP3Q9H6T3 665 aaPredicted RBP9.94□□□□□ -0.82
GINS3-204ENST00000561952 MORF4L1Q9UBU8 362 aa9.94□□□□□ -0.82
GINS3-204ENST00000561952 CEP290O15078 2479 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 RAD21O60216 631 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 FARP2O94887 1054 aaPredicted RBP9.93□□□□□ -0.82
GINS3-204ENST00000561952 SLC34A2O95436 690 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 TFRCP02786 760 aaKnown RBP9.93□□□□□ -0.82
GINS3-204ENST00000561952 HMGCRP04035 888 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 AKR1B1P15121 316 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP14P54578 494 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 RRP1P56182 461 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms