RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 RLFQ13129 1914 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 CNMDO75829 334 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 CYP2B6P20813 491 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 PLCD1P51178 756 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 CATSPERGQ6ZRH7 1159 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
SPG7-205ENST00000561945 PANK1Q8TE04 598 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 ZNF236Q9UL36 1845 aa17.69■□□□□ 0.42
SPG7-205ENST00000561945 TCRBV5S4A2TA0A5A2 114 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 MS4A1P11836 297 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 COL6A1P12109 1028 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
SPG7-205ENST00000561945 GUCY1A2P33402 732 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 BMP8BP34820 402 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 ABCB5Q2M3G0 1257 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 CERKLQ49MI3 558 aaPredicted RBP17.68■□□□□ 0.42
SPG7-205ENST00000561945 PLEKHH3Q7Z736 793 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 NBPF3Q9H094 633 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
SPG7-205ENST00000561945 IGHA2P01877 340 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 VCAM1P19320 739 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 RGS2P41220 211 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 CACNB2Q08289 660 aaPredicted RBP17.67■□□□□ 0.42
SPG7-205ENST00000561945 PDE3AQ14432 1141 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 LHX8Q68G74 356 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 APBA2Q99767 749 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 GDF15Q99988 308 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 ZBTB40Q9NUA8 1239 aa17.67■□□□□ 0.42
SPG7-205ENST00000561945 MAGEB6P1A0A0J9YX57 407 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 HOXC6P09630 235 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 PDE6AP16499 860 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 MAP2K5Q13163 448 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
SPG7-205ENST00000561945 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 KIF1BPQ96EK5 621 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 IL1RAPL2Q9NP60 686 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 MYH8P13535 1937 aa17.66■□□□□ 0.42
SPG7-205ENST00000561945 PARP14Q460N5 1801 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 ZKSCAN1P17029 563 aaPredicted RBP17.65■□□□□ 0.42
SPG7-205ENST00000561945 CCNA1P78396 465 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 RAB3GAP1Q15042 981 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 SLC9C2Q5TAH2 1124 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 PAGR1Q9BTK6 254 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 CRNKL1Q9BZJ0 848 aaKnown RBP17.65■□□□□ 0.42
SPG7-205ENST00000561945 C11orf49Q9H6J7 331 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 PFASO15067 1338 aa17.65■□□□□ 0.42
SPG7-205ENST00000561945 MYH7P12883 1935 aa17.64■□□□□ 0.42
SPG7-205ENST00000561945 SPDYE16A6NNV3 312 aaPredicted RBP17.64■□□□□ 0.41
SPG7-205ENST00000561945 CCL14Q16627 93 aa17.64■□□□□ 0.41
SPG7-205ENST00000561945 FEZ1Q99689 392 aa17.64■□□□□ 0.41
SPG7-205ENST00000561945 BTBD7Q9P203 1132 aa17.64■□□□□ 0.41
SPG7-205ENST00000561945 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
SPG7-205ENST00000561945 ZNF532Q9HCE3 1301 aa17.64■□□□□ 0.41
SPG7-205ENST00000561945 SLC15A5A6NIM6 579 aa17.63■□□□□ 0.41
SPG7-205ENST00000561945 RAB11FIP3O75154 756 aa17.63■□□□□ 0.41
SPG7-205ENST00000561945 HMMRO75330 724 aa17.63■□□□□ 0.41
SPG7-205ENST00000561945 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
SPG7-205ENST00000561945 PTPREP23469 700 aa17.63■□□□□ 0.41
SPG7-205ENST00000561945 CCND3P30281 292 aaPredicted RBP17.63■□□□□ 0.41
SPG7-205ENST00000561945 GRB14Q14449 540 aa17.63■□□□□ 0.41
SPG7-205ENST00000561945 ZYXQ15942 572 aaKnown RBP17.63■□□□□ 0.41
SPG7-205ENST00000561945 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
SPG7-205ENST00000561945 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
SPG7-205ENST00000561945 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
SPG7-205ENST00000561945 LAMA2P24043 3122 aaKnown RBP17.63■□□□□ 0.41
SPG7-205ENST00000561945 A0A1W2PRG0 241 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
SPG7-205ENST00000561945 EVX2Q03828 476 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 SEPT2Q15019 361 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 GPR153Q6NV75 609 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 CCAR1Q8IX12 1150 aaKnown RBP17.62■□□□□ 0.41
SPG7-205ENST00000561945 LCORLQ8N3X6 602 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 RPAP3Q9H6T3 665 aaPredicted RBP17.62■□□□□ 0.41
SPG7-205ENST00000561945 MCM9Q9NXL9 1143 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 FLRT1Q9NZU1 646 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 SWAP70Q9UH65 585 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 DNAH12Q6ZR08 3092 aa17.62■□□□□ 0.41
SPG7-205ENST00000561945 GOLIM4O00461 696 aa17.61■□□□□ 0.41
SPG7-205ENST00000561945 SOX1O00570 391 aaPredicted RBP17.61■□□□□ 0.41
SPG7-205ENST00000561945 ATP5JP18859 108 aa17.61■□□□□ 0.41
SPG7-205ENST00000561945 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
SPG7-205ENST00000561945 C7orf61Q8IZ16 206 aa17.61■□□□□ 0.41
SPG7-205ENST00000561945 BAZ2AQ9UIF9 1905 aaKnown RBP17.6■□□□□ 0.41
SPG7-205ENST00000561945 IFIT2P09913 472 aaKnown RBP17.6■□□□□ 0.41
SPG7-205ENST00000561945 ADD2P35612 726 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 COG2Q14746 738 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 TMEM179Q6ZVK1 233 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 SIAH1Q8IUQ4 282 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 SHCBP1Q8NEM2 672 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms