RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 MRC1P22897 1456 aa21.02■□□□□ 0.95
RAB40C-206ENST00000561781 PRAMEF22A3QJZ6 481 aa21.02■□□□□ 0.95
RAB40C-206ENST00000561781 SNUPNO95149 360 aaKnown RBP21.02■□□□□ 0.95
RAB40C-206ENST00000561781 MAB21L3Q8N8X9 362 aa21.02■□□□□ 0.95
RAB40C-206ENST00000561781 LINC00301Q8NCQ3 95 aa21.02■□□□□ 0.95
RAB40C-206ENST00000561781 RIN2Q8WYP3 895 aaPredicted RBP21.02■□□□□ 0.95
RAB40C-206ENST00000561781 BTAF1O14981 1849 aa21.01■□□□□ 0.95
RAB40C-206ENST00000561781 TAF5LO75529 589 aa21.01■□□□□ 0.95
RAB40C-206ENST00000561781 APBA3O96018 575 aa21.01■□□□□ 0.95
RAB40C-206ENST00000561781 ADKP55263 362 aaKnown RBP21.01■□□□□ 0.95
RAB40C-206ENST00000561781 SH3GL2Q99962 352 aa21.01■□□□□ 0.95
RAB40C-206ENST00000561781 PA2G4Q9UQ80 394 aaKnown RBP21.01■□□□□ 0.95
RAB40C-206ENST00000561781 ANKRD18BA2A2Z9 1011 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 ALDH1L1O75891 902 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 STK38Q15208 465 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 LZTFL1Q9NQ48 299 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 CLIC4Q9Y696 253 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 SLC8A1P32418 973 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 DRP2Q13474 957 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 ZNF569Q5MCW4 686 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 MICAL1Q8TDZ2 1067 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 EHD4Q9H223 541 aa21■□□□□ 0.95
RAB40C-206ENST00000561781 TULP1O00294 542 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-206ENST00000561781 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-206ENST00000561781 CENPHQ9H3R5 247 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 HOMER3Q9NSC5 361 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 IRAK4Q9NWZ3 460 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 EME2A4GXA9 379 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-206ENST00000561781 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-206ENST00000561781 NOA1Q8NC60 698 aaKnown RBP20.99■□□□□ 0.95
RAB40C-206ENST00000561781 BOLA2Q9H3K6 86 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 KIF9Q9HAQ2 790 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 FANCLQ9NW38 375 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 MYO6Q9UM54 1294 aa20.99■□□□□ 0.95
RAB40C-206ENST00000561781 GOLGA8KD6RF30 607 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 GBP2P32456 591 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 CCT2P78371 535 aaKnown RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 PDCD2Q16342 344 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 SPECC1LQ69YQ0 1117 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 PARP9Q8IXQ6 854 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 SAAL1Q96ER3 474 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 RSRC1Q96IZ7 334 aaKnown RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 SLC4A9Q96Q91 983 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 NAPGQ99747 312 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 SLC40A1Q9NP59 571 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 SIPA1L3O60292 1781 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 FRMD3A2A2Y4 597 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 AGPSO00116 658 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 ZEB2O60315 1214 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 TFRCP02786 760 aaKnown RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 USP14P54578 494 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 MTF1Q14872 753 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 HDGFL1Q5TGJ6 251 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 ZNF790Q6PG37 636 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 KCNG4Q8TDN1 519 aa20.98■□□□□ 0.95
RAB40C-206ENST00000561781 ZNF496Q96IT1 587 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-206ENST00000561781 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 GOLGA6L7A0A1B0GV03 622 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 GOLGA6BA6NDN3 693 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 PECAM1P16284 738 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-206ENST00000561781 SKOR1P84550 965 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 AKAP17AQ02040 695 aaKnown RBP20.97■□□□□ 0.95
RAB40C-206ENST00000561781 BEND3Q5T5X7 828 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 CCDC13Q8IYE1 715 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 CCDC8Q9H0W5 538 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-206ENST00000561781 RABEP2Q9H5N1 569 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 NCOA5Q9HCD5 579 aaKnown RBP20.97■□□□□ 0.95
RAB40C-206ENST00000561781 ADGRG1Q9Y653 693 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 COL15A1P39059 1388 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 TARSL2A2RTX5 802 aaKnown RBP20.97■□□□□ 0.95
RAB40C-206ENST00000561781 CAND2O75155 1236 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 RPS6KA3P51812 740 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 GGA2Q9UJY4 613 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 SALL1Q9NSC2 1324 aa20.97■□□□□ 0.95
RAB40C-206ENST00000561781 TNS1Q9HBL0 1735 aaKnown RBP20.97■□□□□ 0.95
RAB40C-206ENST00000561781 SPTLC2O15270 562 aa20.96■□□□□ 0.95
RAB40C-206ENST00000561781 PFKFB1P16118 471 aa20.96■□□□□ 0.95
RAB40C-206ENST00000561781 PRPHP41219 470 aa20.96■□□□□ 0.95
RAB40C-206ENST00000561781 HSP90AA4PQ58FG1 418 aa20.96■□□□□ 0.95
RAB40C-206ENST00000561781 CDCA2Q69YH5 1023 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 UPF1Q92900 1129 aaKnown RBP eCLIP20.96■□□□□ 0.952e-7■■■■■ 32.6
RAB40C-206ENST00000561781 EAF2Q96CJ1 260 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 NAA15Q9BXJ9 866 aaKnown RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 TLR7Q9NYK1 1049 aaKnown RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 PES1O00541 588 aaKnown RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 ARID4AP29374 1257 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 GOLGB1Q14789 3259 aaKnown RBP20.96■□□□□ 0.95
RAB40C-206ENST00000561781 A0A0U1RQJ8 604 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 AP1G2O75843 785 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 CYP21A2P08686 494 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 ATRIPQ8WXE1 791 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 SPDL1Q96EA4 605 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 MYO1AQ9UBC5 1043 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 TUBE1Q9UJT0 475 aa20.95■□□□□ 0.94
RAB40C-206ENST00000561781 IBSPP21815 317 aaPredicted RBP20.95■□□□□ 0.94
RAB40C-206ENST00000561781 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms